| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4100855 = | 25 (0.650) | 4 (0.110) | 3/90 | NT | 13.1% | coding (2179/2322 nt) | yhgF | predicted transcriptional accessory protein |
| ? | W3110S.gb | 4100877 = | 30 (0.850) | coding (2157/2322 nt) | yhgF | predicted transcriptional accessory protein | |||||
TTGTTTTGCGGGCGTTCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACAATGTCGCCCGCT > W3110S.gb/4100809‑4100946 | ttgttTTGCGGGCGTTCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCa < 1:2132003/70‑1 (MQ=255) tgttTTGCGGGCGTTCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCa > 1:2919192/1‑69 (MQ=255) gttTTGCGGGCGTTCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAg > 1:1224094/1‑71 (MQ=255) tttGCGGGCGTTCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGt > 1:3707698/1‑70 (MQ=255) tttGCGGGCGTTCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGt > 1:2269368/1‑70 (MQ=255) gCGGGCGTTCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAg < 1:63375/70‑1 (MQ=255) gTTCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATa < 1:1194678/71‑1 (MQ=255) gTTCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATa < 1:1600473/71‑1 (MQ=255) tcttcagcgtaaacgtatcgccctgactatgCGCCAGGCTGCTCATCCAGGCGCa > 1:668180‑M1/32‑55 (MQ=255) tcttcagcgtaaacgtatcgccctgactatgCGCCAGGCTGCTCATCCAGGCGCa > 1:1978802‑M1/32‑55 (MQ=255) tCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACg > 1:936854/1‑71 (MQ=255) cATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACg < 1:240086/70‑1 (MQ=255) cATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGt > 1:832397/1‑71 (MQ=255) ttcagcgtaaacgtatcgccctgactatgCGCCAGGCTGCTCATCCAGGCGCATa < 1:2310500‑M1/26‑1 (MQ=255) aTTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACg < 1:1052655/69‑1 (MQ=255) ccgccgcGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTg < 1:207369/71‑1 (MQ=255) gcgACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTg > 1:2843088/1‑66 (MQ=255) cgacgaGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGAGCGATACGTTTACGCTGAAGATc < 1:2416188/71‑1 (MQ=255) gacgaGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATcc < 1:130767/71‑1 (MQ=255) cgaGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGtt < 1:1537676/55‑1 (MQ=255) ttGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTg < 1:836783/56‑1 (MQ=255) ttGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAg < 1:617639/59‑1 (MQ=255) ggTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAg > 1:1871524/1‑69 (MQ=255) ggTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCa > 1:2178382/1‑71 (MQ=255) tatgcgcctggatgagcagcctggcgCATAGTCAGGGCGATACGTTTACGCTGaa < 1:2310500‑M2/29‑1 (MQ=255) ttCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATcc > 1:3215042/1‑58 (MQ=255) tgcgcctggatgagcagcctggcgCATAGTCAGGGCGATACGTTTACGCTGAAGa > 1:668180‑M2/25‑55 (MQ=255) tgcgcctggatgagcagcctggcgCATAGTCAGGGCGATACGTTTACGCTGAAGa > 1:1978802‑M2/25‑55 (MQ=255) tCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACttt > 1:2115793/1‑71 (MQ=255) tCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACttt > 1:887158/1‑71 (MQ=255) tCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACttt > 1:1071943/1‑71 (MQ=255) tCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACtt < 1:3629597/70‑1 (MQ=255) tCGCCAGGCTGCTAATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACtt > 1:2582252/1‑61 (MQ=255) GCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCa < 1:1918441‑M1/71‑1 (MQ=255) gctgctCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTc < 1:1620434/65‑1 (MQ=255) tgctCATCCAGGCGCATAGTCAGGGCGATACGTTTACGc < 1:1974673/39‑1 (MQ=255) tgctCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACtt < 1:2181762/61‑1 (MQ=255) ctCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACaa < 1:1887365/71‑1 (MQ=255) tCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTg < 1:2942982/38‑1 (MQ=255) tCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTg < 1:2359856/38‑1 (MQ=255) cgtCCAGACGCATGGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCt > 1:1457896/3‑63 (MQ=255) cagcctggcgCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACAATg < 1:1291107‑M2/61‑1 (MQ=255) aTCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACAAt < 1:3284765/69‑1 (MQ=255) aTCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACAATg < 1:2807437/70‑1 (MQ=255) aTCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACAATg < 1:60863/70‑1 (MQ=255) aTCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACAATGt < 1:476203/71‑1 (MQ=255) aTCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACAATGt > 1:3609694/1‑71 (MQ=255) tCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCa < 1:2304547/58‑1 (MQ=255) cAGGCGCATAGTCAGGGCGATACGTTTACGCTGaa > 1:1639163/1‑35 (MQ=255) cAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACAATGTCg > 1:2326447/1‑70 (MQ=255) ggcgCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCa > 1:1172316‑M2/5‑45 (MQ=255) gcgCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACAATGTCGCCCg > 1:808397‑M2/4‑71 (MQ=255) gCATAGTCAGGGCGATACGTTTACGCTGAAGATCAACTTGCAGCACTTTCACCTTCACAATGTCGCCCGCt < 1:2000429‑M2/70‑1 (MQ=255) | TTGTTTTGCGGGCGTTCATTACCGCCGCCGCGACGAGCGTTGGTTTCGCCAGGCTGCTCATCCAGGCGCATAGTCAGGGCGATACGTTTACGCTGAAGATCCACTTCCAGCACTTTCACCTTCACAATGTCGCCCGCT > W3110S.gb/4100809‑4100946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |