Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC W3110S.gb 4,310,365 Δ1,199 bp 100% insH[alsK] insH, [alsK]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 4310365–4311562 4311563 2–1199 56 [0] [0] 56 insH–[alsK] insH,[alsK]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? W3110S.gb = 43103640 (0.000)45 (1.230) 24/92 NT 100% intergenic (‑286/‑69) yjcS/insH predicted alkyl sulfatase/IS5 element protein
?W3110S.gb 4311564 = 0 (0.000)coding (916/1029 nt) alsK D‑allose kinase

ATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/4310293‑4310364
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAG  >  W3110S.gb/4311564‑4311632
                                                                                                                                             
ATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTT                                                                          >  1:3491657/1‑69
 TATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTA                                                                        >  1:1983717/1‑70
      TGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCA                                                                     >  1:531059/1‑68
       GTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAG                                                                  <  1:116828/70‑1
       GTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAG                                                                  <  1:3830206/70‑1
                GTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGC                                                         >  1:899100/1‑70
                GTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGC                                                         >  1:2808308/1‑70
                   GGCACAGCGTGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAA                                                      <  1:2253941/70‑1
                   GGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAA                                                      >  1:3748941/1‑70
                   GGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAA                                                      >  1:1626297/1‑70
                     CACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAA                                                   <  1:351957/71‑1
                         GCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTT                                               <  1:834071/71‑1
                         GCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTT                                               <  1:860423/71‑1
                           GGGACATTGGGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAA                                                                >  1:1386334/1‑52
                           GGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGT                                                            <  1:858721/56‑1
                           GGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAA                                                                >  1:1197280/1‑52
                              ACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGC                                          >  1:3066723/1‑71
                              ACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGT                                                            >  1:3394446/1‑53
                                 TTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAAC                                                  <  1:326428/60‑1
                                  TGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCC                                       >  1:3129835/1‑70
                                   GCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAA                                     >  1:29778/1‑71
                                   GCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGT                                                >  1:162427/1‑60
                                    CGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAAT                                    <  1:1542614/71‑1
                                       TACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGT                                                            <  1:1087839/44‑1
                                           GTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTc                                                           >  1:2536343/1‑40
                                           GTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTG                             >  1:3307686/1‑71
                                           GTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTG                             >  1:3310160/1‑71
                                           GTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTG                                                           >  1:2517538/1‑41
                                           GTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACT                                                              >  1:2033115/1‑38
                                           GTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAA                                                                >  1:1042986/1‑36
                                           GTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAA                                                                >  1:2148042/1‑36
                                           GTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAA                                                                >  1:1590997/1‑36
                                              CCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCAC                          >  1:1495174/1‑71
                                                 ACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCT                       >  1:3713021/1‑71
                                                 ACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATT                                 <  1:2589138/61‑1
                                                 ACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTT                                               <  1:2560810/47‑1
                                                  CGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTG                      <  1:2150184/71‑1
                                                   GTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCT                       >  1:2215173/1‑69
                                                   GTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCT                       >  1:1656170/1‑69
                                                   GTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATT                                 <  1:2487147/59‑1
                                                   GTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAA                                                     <  1:3347957/39‑1
                                                    TTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAG                    <  1:1653389/71‑1
                                                     TTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGC                   >  1:1674536/1‑71
                                                      TTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATAT                                  >  1:2058367/1‑55
                                                      TTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGC                                          >  1:680556/1‑47
                                                          TCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTT                                               <  1:1620747/38‑1
                                                            ATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTA            <  1:3393682/71‑1
                                                            ATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCAT              >  1:2626318/1‑69
                                                            ATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGC                 >  1:1680603/1‑66
                                                            ATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGC                 >  1:1116193/1‑66
                                                                  CTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGT        >  1:3108499/1‑69
                                                                    TTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAG     >  1:1018657/1‑70
                                                                     TAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAG     <  1:3034318/69‑1
                                                                     TAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAG     >  1:2726828/1‑69
                                                                     TAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATA                                   >  1:2241437/1‑39
                                                                      AGCATAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGATGCACCCTGAGCGCCATTAAAGTCAGAA   <  1:779721/70‑1
                                                                      AGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAA   <  1:133791/70‑1
                                                                       GCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAG  <  1:3360032/70‑1
                                                                                                                                             
ATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/4310293‑4310364
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAG  >  W3110S.gb/4311564‑4311632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.