| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 315707 | NA (NA) | 69 (1.730) | 31/100 | NT | 100% | coding (654/687 nt) | ykgA | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 576911 = | 0 (0.000) | coding (76/498 nt) | ybcS | predicted lysozyme | |||||
CCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAA > W3110S.gb/315645‑315771 | acGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTcc > 1:1752428/2‑71 (MQ=255) cGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGt > 1:143720/1‑68 (MQ=40) cGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGt > 1:2459158/1‑68 (MQ=40) cGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCt > 1:3419756/1‑71 (MQ=255) cGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCt > 1:1438445/1‑71 (MQ=255) cGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGAACATAAAGTCCt > 1:528395/1‑71 (MQ=255) aCAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCggg > 1:3257717/1‑71 (MQ=255) aCAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCggg > 1:2448789/1‑71 (MQ=255) aTTTGAAAACAAGACCCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaaa > 1:2687368/1‑59 (MQ=255) aTTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaaa > 1:1175147/1‑59 (MQ=38) tttGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGt < 1:2316644/71‑1 (MQ=255) tGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGtt < 1:2435883/70‑1 (MQ=255) tGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGtt < 1:2708624/70‑1 (MQ=255) tGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGtt < 1:690535/70‑1 (MQ=255) aaGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCAt < 1:898120/46‑1 (MQ=32) cGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaaa > 1:2054630/1‑41 (MQ=40) cGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaaa > 1:738071/1‑41 (MQ=40) gCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCttt < 1:1530922/65‑1 (MQ=255) gCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCAt < 1:2564484/71‑1 (MQ=255) ggCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAg < 1:1964955/71‑1 (MQ=255) gCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:691374/71‑1 (MQ=255) cTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCat < 1:3846843/71‑1 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGt > 1:3012302/1‑42 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGt < 1:3256896/62‑1 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCata > 1:2004247/1‑69 (MQ=255) tgtCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:2869813/71‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCggg < 1:103101/36‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCggg < 1:1735492/36‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCAt < 1:1367680/58‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCAt < 1:2713061/58‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCAt < 1:2942518/58‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCAt < 1:3197704/58‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCAt < 1:1067075/58‑1 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCa > 1:3723395/1‑62 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca < 1:1935249/71‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGtt < 1:814421/39‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca > 1:2706825/1‑71 (MQ=255) atatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCa < 1:1479581/43‑1 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa < 1:297580/61‑1 (MQ=255) atTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:357851/50‑1 (MQ=255) atTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg < 1:3129700/50‑1 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTGTTTTCGc > 1:2030696/1‑50 (MQ=38) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:875648/1‑59 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATAcc > 1:3406923/1‑71 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATAcc > 1:374374/1‑71 (MQ=255) tACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCg > 1:1784148/1‑71 (MQ=255) tACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCg > 1:345388/1‑71 (MQ=255) aCGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCg < 1:3403626/70‑1 (MQ=255) aCGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCg < 1:3303589/70‑1 (MQ=255) aCGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCg < 1:3285395/70‑1 (MQ=255) aCGTGGGTAGGATCATAAAGTCCTCGGGTCGTTATCCACTCTTTTGGCATGTCAGCATATTCACATACCg < 1:3761410/70‑1 (MQ=255) tGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:3326120/53‑1 (MQ=255) gggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCttt > 1:3649532/1‑40 (MQ=255) gggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCttt > 1:3644983/1‑40 (MQ=255) gTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAga < 1:798487/50‑2 (MQ=255) tAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCa < 1:1247687/71‑1 (MQ=255) ggATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATg > 1:3716044/1‑42 (MQ=255) ggATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCaa < 1:1058950/70‑1 (MQ=255) ggATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCaa < 1:2463477/70‑1 (MQ=255) tCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:3365728/1‑45 (MQ=255) cATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa < 1:2815543/44‑1 (MQ=255) aTAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCAt < 1:3328688/36‑1 (MQ=255) | CCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACATACCGTACCAGCAA > W3110S.gb/315645‑315771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |