| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1668933 | 19 (0.480) | 3 (0.080) | 3/90 | NT | 12.7% | coding (1/696 nt) | ynfK | predicted dethiobiotin synthetase |
| ? | W3110S.gb | = 1668949 | 24 (0.670) | intergenic (‑16/+109) | ynfK/dgsA | predicted dethiobiotin synthetase/DNA‑binding transcriptional repressor | |||||
ATGCGCGGGAAACCACCGTTTTCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAAATAATTAACCTTGAAAGTCTAAGTTAT > W3110S.gb/1668867‑1669002 | aTGCGCGGGAAACCACCGTTTTCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCACt < 1:1886923/71‑1 (MQ=255) cgcgGGAAACCACCGTTTTCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATaacggt < 1:1552233‑M1/70‑7 (MQ=255) cgcgGGAAACCACCGTTTTCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCACTaa > 1:3733645/1‑70 (MQ=255) accaccGTTTTCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGt < 1:1853223/71‑1 (MQ=255) cagttTTCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCCCTAACTCCACCGTTatg < 1:364769‑M2/69‑4 (MQ=255) gTTTTCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCACt < 1:2107932/54‑1 (MQ=255) ttttCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCtt < 1:2602238/71‑1 (MQ=255) ttCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTca > 1:40706/1‑71 (MQ=255) tCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTca > 1:2800728/1‑70 (MQ=255) cTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACaaa < 1:3640296/71‑1 (MQ=255) cAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCa > 1:1636454/1‑42 (MQ=255) cAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCa > 1:2133474/1‑42 (MQ=255) cTGTACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAAcc > 1:3197915/1‑67 (MQ=255) tACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGaaaa < 1:1674022/71‑1 (MQ=255) tACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGaaa < 1:1487596/70‑1 (MQ=255) tACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGaaa < 1:1288348/70‑1 (MQ=255) gTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAAATAAtt < 1:3213489/71‑1 (MQ=255) taataaAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAAc < 1:2567229/57‑1 (MQ=255) taataaAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAAc < 1:3183900/57‑1 (MQ=255) aataaAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAAATAATTaa > 1:823997/1‑71 (MQ=255) ataaAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTcaca < 1:3119420/46‑1 (MQ=255) ataaAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAAATAATTAAc < 1:2794406/71‑1 (MQ=255) taaAGAAACGCTTCAGCATaacggtggagttagtgat < 1:307437‑M1/37‑19 (MQ=255) aaGAAACGCTTCAGCATaacggtggagttagtgatgc > 1:1117237‑M1/1‑17 (MQ=255) cGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAaat < 1:2491781/55‑1 (MQ=255) cGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAaat < 1:1714784/55‑1 (MQ=255) tCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAAATAATTAACCTTGAAAGTCt > 1:3437397/1‑69 (MQ=255) aGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAAATAATTAACCTTGAAAGTCTAAGt > 1:2648512/1‑71 (MQ=255) gCATCACTAACTCCACCGTTatgctgaagcgtttctt > 1:1117237‑M2/1‑20 (MQ=255) cATaacggtggagttagggatgctgaagcgtttctttattaccggtacagacacttctgtagggaaaactg < 1:364769‑M1/71‑69 (MQ=255) cATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAaat < 1:2324601/47‑1 (MQ=255) cATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAaat < 1:2044301/47‑1 (MQ=255) aTCACTAACTCCACCGTTatgctgaagcgtttcttta < 1:307437‑M2/37‑20 (MQ=255) aTCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAAATAATTAACCTTGAAAGTCTAAGTTAt > 1:1652282/1‑71 (MQ=255) tCACTAACTCCACCGTTATGCTTCACAAATATAAAcc < 1:3074572/37‑1 (MQ=255) | ATGCGCGGGAAACCACCGTTTTCCCTACAGAAGTGTCTGTACCGGTAATAAAGAAACGCTTCAGCATCACTAACTCCACCGTTATGCTTCACAAATATAAACCAGGAAAATAATTAACCTTGAAAGTCTAAGTTAT > W3110S.gb/1668867‑1669002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |