BRESEQ :: Evidence

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	575791	575999	209	7 [3]	[1] 104	nmpC	DLP12 prophage region; ECK0544:JW5078:b0553; truncated outer membrane porin

Only 100 of 104 total aligned reads displayed.

ACTTTCCCGTACAGATCCAGCTTGTTACTGTCTTTATTATAAATTTCAGCTGCCTGAGCAGACATCGCCATTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCGTGAGCCCTTTTTTTGAAC  >  W3110S.gb/575930‑576068

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      <  1:2009565‑M2/1‑1 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      <  1:74413‑M2/1‑1 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:608662‑M2/71‑71 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:470791‑M2/71‑71 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:41078‑M2/71‑71 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      <  1:2221136‑M2/1‑1 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:2412010‑M2/71‑71 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      <  1:1204953‑M2/1‑1 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      <  1:2503895‑M2/1‑1 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:2958203‑M2/71‑71 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      <  1:3645163‑M2/1‑1 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      <  1:1803785‑M2/1‑1 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:1327612‑M2/71‑71 (MQ=255)

atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:1347629‑M2/71‑71 (MQ=255)

 tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                     <  1:3634739‑M2/2‑1 (MQ=255)

 tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                     <  1:172954‑M2/2‑1 (MQ=255)

 tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                     <  1:3836054‑M2/2‑1 (MQ=255)

 tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                     <  1:1173653‑M2/2‑1 (MQ=255)

 tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      <  1:221976‑M2/1‑1 (MQ=255)

  gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                     <  1:1330554‑M2/2‑1 (MQ=255)

  gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:1001382‑M2/69‑69 (MQ=255)

   atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa                                                                    <  1:393657‑M2/3‑1 (MQ=255)

   atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   >  1:1896723‑M2/68‑71 (MQ=255)

   atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   >  1:858423‑M2/68‑71 (MQ=255)

   atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   <  1:3073867‑M2/4‑1 (MQ=255)

   atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   >  1:334026‑M2/68‑71 (MQ=255)

   atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   >  1:3705407‑M2/68‑71 (MQ=255)

   atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   >  1:1112057‑M2/68‑71 (MQ=255)

   atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   <  1:1497203‑M2/4‑1 (MQ=255)

    tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                     >  1:1105168‑M2/67‑68 (MQ=255)

    tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   >  1:781044‑M2/67‑70 (MQ=255)

    tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGt                                                                  <  1:3816495‑M2/5‑1 (MQ=255)

      aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAc                                                                >  1:2606491‑M2/65‑71 (MQ=255)

      aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAc                                                                <  1:3755113‑M2/7‑1 (MQ=255)

      aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAc                                                                <  1:2216133‑M2/7‑1 (MQ=255)

       accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAc                                                                <  1:3751244‑M2/7‑1 (MQ=255)

       accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACt                                                               <  1:3059975‑M2/8‑1 (MQ=255)

          ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   <  1:1448364‑M2/4‑1 (MQ=255)

          ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGAt                                                            >  1:3109540‑M2/61‑71 (MQ=255)

           tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      <  1:2052853‑M2/1‑1 (MQ=255)

             ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   >  1:442771‑M2/58‑61 (MQ=255)

             ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTa                                                                 >  1:3147707‑M2/58‑63 (MQ=255)

             ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTa                                                                 >  1:597615‑M2/58‑63 (MQ=255)

             ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATg                                                           >  1:3318922‑M2/58‑69 (MQ=255)

               ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:1271837‑M2/56‑56 (MQ=255)

               ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa                                                                    >  1:3656661‑M2/56‑58 (MQ=255)

               ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGc                                                       >  1:14271‑M2/56‑71 (MQ=255)

               ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGc                                                       >  1:1397679‑M2/56‑71 (MQ=255)

                tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                     <  1:2350468‑M2/2‑1 (MQ=255)

                  tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGc                                                       <  1:1877026‑M2/16‑1 (MQ=255)

                        cagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                     <  1:518582‑M2/2‑1 (MQ=255)

                        cagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                     <  1:2966352‑M2/2‑1 (MQ=255)

                        cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGTTGCAGc                                                       <  1:37‑M2/16‑1 (MQ=255)

                        cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGc                                                       <  1:1550742‑M2/16‑1 (MQ=255)

                        cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGc                                                       <  1:1275942‑M2/16‑1 (MQ=255)

                        cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGa                                              <  1:3810810‑M2/25‑1 (MQ=255)

                         agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   <  1:1852257‑M2/4‑1 (MQ=255)

                         agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   <  1:2189599‑M2/4‑1 (MQ=255)

                          gatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                     <  1:2953438‑M2/2‑1 (MQ=255)

                          gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGaaa                                            >  1:2590613‑M2/45‑71 (MQ=255)

                          gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGaa                                             >  1:657180‑M2/45‑70 (MQ=255)

                           atgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAAt                                           >  1:1646060‑M2/44‑71 (MQ=255)

                            tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   <  1:2987230‑M2/4‑1 (MQ=255)

                            tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg                                                                   >  1:764273‑M2/43‑46 (MQ=255)

                            tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAc                                                                >  1:2368959‑M2/43‑49 (MQ=255)

                            tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAc                                                                >  1:3152681‑M2/43‑49 (MQ=255)

                            tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTg                                                              >  1:413219‑M2/43‑51 (MQ=255)

                             gacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:2855547‑M2/42‑42 (MQ=255)

                             gacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                      >  1:1240405‑M2/42‑42 (MQ=255)

                             gacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGa                                                             >  1:1247569‑M2/42‑51 (MQ=255)

                               caaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTg                                         <  1:1000316‑M2/30‑1 (MQ=255)

                                      gatctcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGt                                  >  1:2557208‑M2/33‑69 (MQ=255)

                                          tcatatcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGa                                              <  1:340156‑M2/25‑1 (MQ=255)

                                          tcatatcagggacttgttcgcaccttccTTAGTACTGATGCACCTa                                                     >  1:3792206‑M2/29‑46 (MQ=255)

                                           catatcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAAtttt                           >  1:1919971‑M2/28‑71 (MQ=255)

                                           catatcagggacttgttcgcaccttcaTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAAttt                            >  1:529104‑M2/28‑70 (MQ=255)

                                            atatcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAAtttt                           <  1:801537‑M2/44‑1 (MQ=255)

                                               tcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAAtt                                          >  1:725172‑M2/24‑52 (MQ=255)

                                               tcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCa                       >  1:3583052‑M2/24‑71 (MQ=255)

                                               tcagggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCa                       >  1:2690097‑M2/24‑71 (MQ=255)

                                                 agggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTaa                               >  1:3111953‑M2/22‑61 (MQ=255)

                                                 agggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTaa                               >  1:2040090‑M2/22‑61 (MQ=255)

                                                 agggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTaa                               >  1:469282‑M2/22‑61 (MQ=255)

                                                 agggacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATc                     >  1:1074135‑M2/22‑71 (MQ=255)

                                                    gacttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCGTg                  <  1:1287843‑M2/53‑1 (MQ=255)

                                                       ttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGa                                              <  1:2573929‑M2/25‑1 (MQ=255)

                                                       ttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCg                    >  1:1448300‑M2/16‑66 (MQ=255)

                                                       ttgttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCGt                   <  1:738640‑M2/52‑1 (MQ=255)

                                                         gttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAAt                                           >  1:1046918‑M2/14‑41 (MQ=255)

                                                         gttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCGTGAGccc             >  1:2515227‑M2/14‑71 (MQ=255)

                                                         gttcgcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCGTGAGcc              >  1:3646299‑M2/14‑70 (MQ=255)

                                                             gcaccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCGTGAGCCCttt          <  1:3344697‑M2/61‑1 (MQ=255)

                                                              cATCGCCATCAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATTGt                   >  1:3785229/1‑60 (MQ=39)

                                                               accttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCa                       >  1:2916491‑M2/8‑55 (MQ=255)

                                                                ccttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATc                     <  1:1158086‑M2/50‑1 (MQ=255)

                                                                ccttcc‑TAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATc                     <  1:2320990‑M2/49‑1 (MQ=255)

                                                                  ttccTTAGTACTGATGCAGCTACAGCAGAAATTGc                                        <  1:1936933‑M2/31‑1 (MQ=255)

                                                                  ttccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCGTGAGCCCTTTTTTTg     >  1:769883‑M2/5‑70 (MQ=255)

                                                                    ccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCGTGAGCCCTTTTTTTGAAc  >  1:2259054‑M2/3‑71 (MQ=255)

                                                                    ccTTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCGTGAGCCCTTTTTTTGAAc  >  1:3017856‑M2/3‑71 (MQ=255)

ACTTTCCCGTACAGATCCAGCTTGTTACTGTCTTTATTATAAATTTCAGCTGCCTGAGCAGACATCGCCATTAGTACTGATGCAGCTACAGCAGAAATTGCCACTGTTAATTTTTTCATCGTGAGCCCTTTTTTTGAAC  >  W3110S.gb/575930‑576068

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`