Predicted mutation
evidence seq id position mutation freq annotation gene description
RA W3110S.gb 4,379,728 A→G 13.6% R204R (CGT→CGC yjeK ← predicted lysine aminomutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb4,379,7280AG13.6% 105.4 / 8.9 44R204R (CGT→CGCyjeKpredicted lysine aminomutase
Reads supporting (aligned to +/- strand):  ref base A (15/23);  new base G (3/3);  total (18/26)
Fisher's exact test for biased strand distribution p-value = 6.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01

GTTGATGTGATTCACCAGCAAGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTTATATGCGGGATGGCTTCCAGT  >  W3110S.gb/4379659‑4379797
                                                                     |                                                                     
gTTGATGTGATTCACCAGCAAGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATAc                                                                      >  1:1658579/1‑71 (MQ=255)
   gATGTGATTCACCAGCAAGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGt                                                                    <  1:3724182/70‑1 (MQ=255)
     tgtgATTCACCAGCAAGATTTGCAGCGTAGAATGTGAAAAGCGTTCAACCAGCGCATCTGTGATGCGTGcc                                                                 <  1:1095925/71‑1 (MQ=255)
     tgtgATTCACCAGCAAGATTTGCAGCGTAGAATGTGAAAAGCGTTCAACCAGCGCATCTGTGATGCGTGcc                                                                 <  1:512688/71‑1 (MQ=255)
     tgtgATTCACCAGCAAGATTTGCAGCGTAGAATGTGAAAAGCGTTCAACCAGCGCATCTGTGATGCGTGcc                                                                 <  1:2075053/71‑1 (MQ=255)
     tgtgATTCACCAGCAAGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGcc                                                                 <  1:3761002/71‑1 (MQ=255)
         aTTCACCAGCAAGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCggg                                                              <  1:3584484/70‑1 (MQ=255)
          ttCACCAGCAAGATTTGCAGCGTAGAACGGGCAAAGGATTCAACCAGCGCCTCGGTGATACGTGCCGGGAt                                                            <  1:2258834/71‑1 (MQ=255)
             aCCAGCAAGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATca                                                          <  1:3578353/70‑1 (MQ=255)
              ccAGCAAGATTTGCAGTGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATcaca                                                        <  1:517779/71‑1 (MQ=255)
              ccAGCAAGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATcaca                                                        <  1:761821/71‑1 (MQ=255)
               cAGCAAGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACaa                                                       <  1:1358240/71‑1 (MQ=255)
                   aaGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCgg                                                   <  1:3726326/71‑1 (MQ=255)
                    aGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCgg                                                   >  1:3109006/1‑70 (MQ=255)
                       tttGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATa                                                                       <  1:1131009/47‑1 (MQ=255)
                         tGCAGCGTAGAATGTGAAAAGCGTTCAACCAGCGCATCTGTGATGCGTGCCGGGAt                                                            >  1:1430725/1‑56 (MQ=255)
                                tAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGa                                      <  1:1401494/71‑1 (MQ=255)
                                tAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGa                                      <  1:3240926/71‑1 (MQ=255)
                                 aGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGaa                                     >  1:200072/1‑71 (MQ=255)
                                     cGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCg                                 <  1:3059175/71‑1 (MQ=255)
                                      gggCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATcaca                                                        <  1:3766599/47‑1 (MQ=255)
                                      gggCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCg                                 >  1:208526/1‑70 (MQ=255)
                                      gggCAAAGCATTCAACCAGCGACTCGGTGATACGTGCCGGGATcaca                                                        <  1:419957/47‑1 (MQ=255)
                                           aaGCATTCAACGAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACg                           >  1:2517910/1‑71 (MQ=255)
                                           aaGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACg                           >  1:1381942/1‑71 (MQ=255)
                                            aGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGCATCCGCAGACGt                          >  1:3734849/1‑71 (MQ=255)
                                              cATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGttt                        <  1:1991477/71‑1 (MQ=255)
                                                ttCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAg                              <  1:147809/63‑1 (MQ=255)
                                                ttCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGtttt                       <  1:1075261/70‑1 (MQ=255)
                                                  cAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTtata                    >  1:936445/1‑71 (MQ=255)
                                                  cAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTtata                    >  1:1006390/1‑71 (MQ=255)
                                                  cAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTtata                    >  1:3251905/1‑71 (MQ=255)
                                                  cAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTtat                     <  1:2172407/70‑1 (MQ=255)
                                                  cAACCAGCGACTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTtata                    >  1:1250179/1‑71 (MQ=255)
                                                   aaCCAGCGCATCTGTGATGCGTGCCGGGATCACAATCGGCAGACGACTGTGAATCCGCAGACGTTTGatat                   >  1:258550/1‑71 (MQ=255)
                                                   aaCCAGCGCATCTGTGATGCGTGCCGGGATCACAATCGGCAGACCACTGTGAATCCGCAGACGTTTgata                    >  1:1375135/1‑70 (MQ=255)
                                                       aGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTTATATGCgg               <  1:1858938/71‑1 (MQ=255)
                                                             tCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTta                      <  1:3287292/58‑1 (MQ=255)
                                                             tCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTTATATGAGGGATGGc         >  1:3847107/1‑71 (MQ=255)
                                                             tCGGTGATACGTGCCGGGATCACAATCGCCAGACGGCTGTGAATCCGCAGACGTTTTATATGCGGGATGGc         >  1:3803902/1‑71 (MQ=255)
                                                               ggTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGaa                                     >  1:3651165/1‑41 (MQ=255)
                                                               ggTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTTATATGCGGGATGGCtt       >  1:1457185/1‑71 (MQ=255)
                                                                  gATACTTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTtat                     <  1:392825/54‑1 (MQ=255)
                                                                   aTACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTTATATGCGGGATGGCTTCCa    <  1:2621224/70‑1 (MQ=255)
                                                                    tACGTGCCGTGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTTATATGCGGGATGGCTTCCAg   <  1:3512363/70‑1 (MQ=255)
                                                                     aCGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGATTTATATGCGGGATGGCTTCCAGt  >  1:3562050/1‑70 (MQ=255)
                                                                     |                                                                     
GTTGATGTGATTCACCAGCAAGATTTGCAGCGTAGAACGGGCAAAGCATTCAACCAGCGCCTCGGTGATACGTGCCGGGATCACAATCGGCAGACGGCTGTGAATCCGCAGACGTTTTATATGCGGGATGGCTTCCAGT  >  W3110S.gb/4379659‑4379797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: