Predicted mutation
evidence seq id position mutation freq annotation gene description
RA W3110S.gb 1,442,292 G→A 8.7% G69G (GGC→GGT ydbK ← fused predicted Fe‑S subunit of pyruvate‑flavodoxin oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb1,442,2920GA 8.7% 131.2 / 2.0 46G69G (GGC→GGTydbKfused predicted Fe‑S subunit of pyruvate‑flavodoxin oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (28/14);  new base A (2/2);  total (30/16)
Fisher's exact test for biased strand distribution p-value = 6.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGGTGTGTCTCCCCAAA  >  W3110S.gb/1442223‑1442359
                                                                     |                                                                   
cGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAgcgc                                                                    <  1:1684064/71‑1 (MQ=255)
cGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAgcgc                                                                    <  1:2469863/71‑1 (MQ=255)
  tCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCa                                                                  >  1:965905/1‑71 (MQ=255)
  tCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCa                                                                  <  1:994152/71‑1 (MQ=255)
     ggATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATg                                                                >  1:3287086/1‑70 (MQ=255)
      gATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCa                                                              >  1:2144974/1‑71 (MQ=255)
        tcatcaGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCAt                                                                 >  1:3701839/1‑66 (MQ=255)
        tcatcaGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACg                                                            >  1:1872921/1‑71 (MQ=255)
         catcaGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACgg                                                           >  1:1869405/1‑71 (MQ=255)
         catcaGAAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACgg                                                           >  1:9125/1‑71 (MQ=255)
              gcagcaAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCg                                                      <  1:2114132/71‑1 (MQ=255)
               cagcaAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGa                                                     <  1:1162788/71‑1 (MQ=255)
                   aaaCCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAg                                                  >  1:3444443/1‑70 (MQ=255)
                    aaCCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGc                                                       <  1:559067/64‑1 (MQ=255)
                    aaCCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGc                                                       <  1:43439/64‑1 (MQ=255)
                    aaCCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGc                                                       <  1:2955729/64‑1 (MQ=255)
                    aaCCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGc                                                       <  1:2864628/64‑1 (MQ=255)
                        cTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAg                                                  <  1:187065/65‑1 (MQ=255)
                         tGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCAccc                                             <  1:507963/69‑1 (MQ=255)
                         tGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCAccc                                             <  1:2824928/69‑1 (MQ=255)
                           cGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAg                                                  >  1:413732/1‑62 (MQ=255)
                           cGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAg                                                  >  1:1448481/1‑62 (MQ=255)
                             aTGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAgcgc                                                                    <  1:2366216/42‑1 (MQ=255)
                             aTGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAgcgc                                                                    <  1:976418/42‑1 (MQ=255)
                               gACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGa                                     >  1:213019/1‑71 (MQ=255)
                                     aaCGATGTTGAAAGTTCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCAt                               >  1:3252903/1‑71 (MQ=255)
                                     aaCGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGa                                                     >  1:2901871/1‑49 (MQ=255)
                                     aaCGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGa                                                     >  1:2973211/1‑49 (MQ=255)
                                     aaCGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGa                                                     >  1:1324644/1‑49 (MQ=255)
                                     aaCGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCAt                               >  1:2515436/1‑71 (MQ=255)
                                            ttGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAAc                         <  1:1012889/70‑1 (MQ=255)
                                              gAAAGGTCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCAc                      >  1:249/1‑71 (MQ=255)
                                              gAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCa                       >  1:460353/1‑70 (MQ=255)
                                              gAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCAc                      >  1:3283919/1‑71 (MQ=255)
                                                aaGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCAcgc                    <  1:681553/71‑1 (MQ=255)
                                                   ggCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCgtg                 >  1:1763711/1‑71 (MQ=255)
                                                     cACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCgtggt               <  1:3481199/71‑1 (MQ=255)
                                                      aCCAGTTTGCAAAGCACCATGCACGGTAGCGATAGCACCCGTTTCCGACTGCATTTc                            >  1:1013577/1‑57 (MQ=255)
                                                      aCCAGTTTGCAAAGCACCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCAttt                             >  1:3105987/1‑56 (MQ=255)
                                                         cGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGgtgtgt           <  1:663336/71‑1 (MQ=255)
                                                          gtttGCAAAGCACCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGGTGTGtc          <  1:1555577/68‑1 (MQ=255)
                                                          gtttGCAAAGCACCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGGTGTGtc          <  1:1057982/68‑1 (MQ=255)
                                                          gTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCAcg                     >  1:3764458/1‑60 (MQ=255)
                                                             tGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCAGGCGTGGTGTGTCTcc       >  1:3203817/1‑71 (MQ=255)
                                                                 aaGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGGTGTGTCTCCCCa    >  1:3639828/1‑70 (MQ=255)
                                                                 aaGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGGTGTGTCTCCCCa    >  1:471452/1‑70 (MQ=255)
                                                                 aaGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGGTGTGTCTCCCCa    >  1:2513879/1‑70 (MQ=255)
                                                                  aGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGGTGTGTCTCCCCaaa  >  1:400580/1‑71 (MQ=255)
                                                                  aGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGGTGTGTCTCCCCaaa  >  1:2416204/1‑71 (MQ=255)
                                                                  aGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGGTGTGTCTCCCCaaa  >  1:1403379/1‑71 (MQ=255)
                                                                     |                                                                   
CGTCGGGATCATCAGCAGCAAACCCTGCGATGACGTAAACGATGTTGAAAGGGCACCCGTCTGCAAAGCGCCATGCACGGTAGCGATAGCACCCGCTTCCGACTGCATTTCAACCACGCGTGGTGTGTCTCCCCAAA  >  W3110S.gb/1442223‑1442359

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: