| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | W3110S.gb | 9,442 | T→C | 28.3% | L46S (TTA→TCA) | mog → | predicted molybdochelatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 9,442 | 0 | T | C | 28.3% | 67.2 / 33.9 | 46 | L46S (TTA→TCA) | mog | predicted molybdochelatase |
| Reads supporting (aligned to +/- strand): ref base T (18/15); new base C (7/6); total (25/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATG > W3110S.gb/9375‑9500 | ggCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTa < 1:3350183/69‑1 (MQ=255) aTCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATc < 1:778355/69‑1 (MQ=255) ccTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATcccc > 1:1153999/1‑69 (MQ=255) ccTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATcccc > 1:3689850/1‑69 (MQ=255) ccTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATcccc > 1:564334/1‑69 (MQ=255) ccTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATcccc > 1:3191207/1‑69 (MQ=255) cTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATcccc < 1:619688/68‑1 (MQ=255) tGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATcccc > 1:218400/1‑54 (MQ=255) tGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCg > 1:1650940/1‑55 (MQ=255) tGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGatc > 1:3661755/1‑69 (MQ=255) tGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGatc < 1:2071971/69‑1 (MQ=255) tGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGatc < 1:1922425/69‑1 (MQ=255) tGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGatc < 1:1117584/69‑1 (MQ=255) ggCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGatc < 1:340607/68‑1 (MQ=255) ggCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGatc < 1:641997/68‑1 (MQ=255) ggCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGatc < 1:483625/68‑1 (MQ=255) aTCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:1995228/69‑1 (MQ=255) ggCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAg > 1:129188/1‑49 (MQ=255) ggCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGat > 1:1322087/1‑57 (MQ=255) ggCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAAc > 1:2702480/1‑69 (MQ=255) ggCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAAc > 1:2519611/1‑69 (MQ=255) ggCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAAc > 1:1797207/1‑69 (MQ=255) ggCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATACCCGATGAGCAGGCGATCATCGa > 1:3714215/1‑63 (MQ=255) cgcTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGt > 1:2835431/1‑69 (MQ=255) cgcTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGt > 1:125308/1‑69 (MQ=255) cTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTtg < 1:953899/69‑1 (MQ=255) aCCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTtgt > 1:1863987/1‑67 (MQ=255) cGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGc > 1:372677/1‑69 (MQ=255) cGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGc > 1:3715155/1‑69 (MQ=255) tGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCtggtgg > 1:204958/1‑68 (MQ=255) tGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCtggtg > 1:118564/1‑67 (MQ=255) tGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGat < 1:984997/39‑1 (MQ=255) tGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGat > 1:2142874/1‑39 (MQ=255) tGAACTGGAAACACGCTCAATCCCCGATGAGCAGGCGat > 1:3237301/1‑39 (MQ=38) cTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGa < 1:653240/68‑1 (MQ=255) cTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGa < 1:3279411/68‑1 (MQ=255) cTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGa < 1:2737283/68‑1 (MQ=255) cTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGa < 1:2253874/68‑1 (MQ=255) cTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGa < 1:1385853/68‑1 (MQ=255) tGGAAACCCGCTTAATCCCTGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGaa > 1:666607/1‑68 (MQ=255) ggAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGaa > 1:1568749/1‑67 (MQ=255) gAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATg > 1:2216239/1‑69 (MQ=255) aaCCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATg < 1:3299244/67‑1 (MQ=255) aaCCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATg < 1:2596363/67‑1 (MQ=255) aaCCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATg < 1:504222/67‑1 (MQ=255) aaCCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATg < 1:1849291/67‑1 (MQ=255) | GGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATG > W3110S.gb/9375‑9500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |