Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1414391	1414441	51	19 [1]	[0] 2	intR	integrase

AATGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCTTCAAATGGTTTGGTTGATATA  >  W3110S.gb/1414321‑1414410                                                                      |                     aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:1536811/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:853469/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:658608/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:647714/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:555337/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:543366/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:4733/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:231570/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:1713957/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:1023005/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:137464/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:1334488/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:131609/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:1230695/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:113462/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:1079727/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAACGGATCAGGCTATATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:561683/1‑70 (MQ=255) aaTGCATTGAATTCTGTTTTAGATAAAGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCtt                      >  1:1441912/1‑70 (MQ=255)                     aGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCTTCAAATGGTTTGGTTGAtata  <  1:1338971/70‑1 (MQ=255)                                                                      |                     AATGCATTGAATTCTGTTTTAGATAACGGATCAGGCTTTATTCTGTTTCGCTGTAATTTTTTTACTCCTTCAAATGGTTTGGTTGATATA  >  W3110S.gb/1414321‑1414410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑