Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1430690	1430690	1	2 [0]	[0] 2	lomR lomR	ECK1366:JW5884+JW5904:b4570; Rac prophage region; hypothetical protein ECK1366:JW5904:b1371; Rac prophage region; hypothetical protein, C‑ter fragment

GATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTAT  >  W3110S.gb/1430621‑1430689                                                                     | gATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTtat  >  1:1806563/1‑69 (MQ=255) gATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTtat  >  1:799039/1‑69 (MQ=255)                                                                     | GATATTGCTTATGAAGGCCCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTAT  >  W3110S.gb/1430621‑1430689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑