| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | W3110S.gb | 9,442 | T→C | 53.1% | L46S (TTA→TCA) | mog → | predicted molybdochelatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 9,442 | 0 | T | C | 53.1% | 2.4 / 41.8 | 32 | L46S (TTA→TCA) | mog | predicted molybdochelatase |
| Reads supporting (aligned to +/- strand): ref base T (2/13); new base C (4/13); total (6/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGCC > W3110S.gb/9381‑9507 | ccTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATc > 1:1274984/1‑66 (MQ=255)ccTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATc > 1:1848901/1‑66 (MQ=255) gCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGatcatc > 1:752397/1‑70 (MQ=255) gCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGatcatc > 1:1281953/1‑70 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:1005571/71‑1 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:714408/71‑1 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:694805/71‑1 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:288218/71‑1 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:94240/71‑1 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:1571948/71‑1 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:1152781/71‑1 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:1851932/71‑1 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:1287168/71‑1 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:1425643/71‑1 (MQ=255) aCATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:1752227/71‑1 (MQ=255) ggCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAACGt < 1:1719673/71‑1 (MQ=255) ggCGCTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAACGt < 1:1518547/71‑1 (MQ=255) gcgcTAACCACGCCGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCa < 1:94944/65‑1 (MQ=255) cGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCtggtg < 1:1708325/71‑1 (MQ=255) cGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCtggtg < 1:238671/71‑1 (MQ=255) cGTTTGAACTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCtggtg < 1:1072701/71‑1 (MQ=255) tGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGAt > 1:722908/1‑70 (MQ=255) tGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGAt > 1:1019015/1‑70 (MQ=255) aaCTGGAAACCCGCTCAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGa < 1:362567/70‑1 (MQ=255) ccGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGcc < 1:901682/71‑1 (MQ=255) ccGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGcc < 1:980055/71‑1 (MQ=255) ccGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGcc < 1:488957/71‑1 (MQ=255) ccGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGcc < 1:382704/71‑1 (MQ=255) ccGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGcc < 1:177247/71‑1 (MQ=255) ccGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGcc < 1:170965/71‑1 (MQ=255) ccGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGcc < 1:1013020/71‑1 (MQ=255) cGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGcc < 1:230649/70‑1 (MQ=255) | CCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGCC > W3110S.gb/9381‑9507 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |