| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 2,897,815 | Δ1 bp | coding (260/1455 nt) | ygcU ← | predicted FAD containing dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 2,897,814 | 0 | T | . | 100.0% | 60.4 / NA | 15 | coding (261/1455 nt) | ygcU | predicted FAD containing dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (12/3); total (12/3) | |||||||||||
TGATTTGATTCATGGCGGAGCCGTCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACCTTCGGTGGCGGAAGCACCGGTACGCGGCACACCGTTAATTTTGTGCGCATTCATAAAATTC > W3110S.gb/2897750‑2897874 | tgatttgattCATGGCGGAGCCGTCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACCt > 1:458303/1‑65 (MQ=255)tgatttgattCATGGCGGAGCCGTCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACCt > 1:1860552/1‑65 (MQ=255) gCGGAGCCGTCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACC‑TCGGTGGCGGAAGc > 1:744435/1‑64 (MQ=255) gCGGAGCCGTCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACC‑TCGGTGGCGGAAGc > 1:119560/1‑64 (MQ=255) gCGGAGCCGTCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACC‑TCGGTGGCGGAAGCa > 1:179754/1‑65 (MQ=255) gCGGAGCCGTCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACC‑TCGGTGGCGGAAGCa > 1:2353589/1‑65 (MQ=255) gCGGAGCCGTCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACC‑TCGGTGGCGGAAGCa > 1:2203068/1‑65 (MQ=255) gCGGAGCCGTCGAGCACCACCGAGTTTTATACAACAGTTTCCAGCCCACC‑TCGGTGGCGGAAGc > 1:1213937/1‑64 (MQ=255) tCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACCt > 1:1783502/1‑42 (MQ=255) tCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACC‑TCGGTGGCGGCAGCACCGGTAcg > 1:215980/1‑64 (MQ=255) tCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACC‑TCGGTGGCGGAAGCACCGGTAcgc > 1:2857888/1‑65 (MQ=255) tCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACC‑TCGGTGGCGGAAGCACCGGTAcgc > 1:2135432/1‑65 (MQ=255) acaacaGTTTCCAGCCCACC‑TCGGTGGCGGAAGCACCGGTACGCGGCACACCGTTAATTTtgtg > 1:2095955/1‑64 (MQ=255) acaacaGTTTCCAGCCCACC‑TCGGTGGCGGAAGCACCGGTACGCGGCACACCGTTAATTTtgtg > 1:1975982/1‑64 (MQ=255) acaacaGTTTCCAGCCCACC‑TCGGTGGCGGAAGCACCGGTACGCGGCACACCGTTAATTTtgtg > 1:1952590/1‑64 (MQ=255) gCCCACC‑TCGGTGGCGGAAGCACCGGTACGCGGCACACCGTTAATTTTGTGCGCATTCATAAAAt < 1:1267862/65‑1 (MQ=255) ccACC‑TCGGTGGCGGAAGCACCGGTACGCGGCACACCGTTAATTTTGTGCGCATTCATAAAATTc < 1:1594235/65‑1 (MQ=255) ccACC‑TCGGTGGCGGAAGCACCGGTACGCGGCACACCGTTAATTTTGTGCGCATTCATAAAATTc < 1:821725/65‑1 (MQ=255) | TGATTTGATTCATGGCGGAGCCGTCGAGCACCACCGAGTTTTCTACAACAGTTTCCAGCCCACCTTCGGTGGCGGAAGCACCGGTACGCGGCACACCGTTAATTTTGTGCGCATTCATAAAATTC > W3110S.gb/2897750‑2897874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |