Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 3,359,804 +A coding (752/1419 nt) gltD → glutamate synthase, 4Fe‑4S protein, small subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb3,359,8001.A100.0% 108.1 / NA 35E250K (GAA→AAA) gltDglutamate synthase, 4Fe‑4S protein, small subunit
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base A (35/0);  total (35/0)

TGAGTGATTACGATGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAAC  >  W3110S.gb/3359738‑3359853
                                                               |                                                     
tgAGTGATTACGATGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGa                                                      >  1:1120614/1‑64 (MQ=255)
tgAGTGATTACGATGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGa                                                      >  1:247394/1‑64 (MQ=255)
tgAGTGATTACGATGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGa                                                      >  1:1011501/1‑64 (MQ=255)
tgAGTGATTACGATGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGa                                                      >  1:1887626/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGAc                                            >  1:2581997/1‑63 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:912464/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:2473987/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:239403/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:2345795/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:2258632/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:3081993/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:596314/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:2004781/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:1915618/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:1882452/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:1795105/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:633862/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:1351064/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:1294650/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:1290767/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAAACGAAGACg                                           >  1:635963/1‑64 (MQ=255)
            aTGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGCTGGaa                                                     >  1:2975891/1‑52 (MQ=255)
                                           gTCAATGCGCGGCGGGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTc           >  1:1859243/1‑65 (MQ=255)
                                           gTCAATGCGCGGCGGGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTc           >  1:628751/1‑65 (MQ=255)
                                           gTCAATGCGCGGCGGGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTc           >  1:2371626/1‑65 (MQ=255)
                                           gTCAATGCGCGGCGGGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTc           >  1:1266785/1‑65 (MQ=255)
                                                 gcgcGGCGGGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGcc     >  1:2264460/1‑65 (MQ=255)
                                                 gcgcGGCGGGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGcc     >  1:2861830/1‑65 (MQ=255)
                                                 gcgcGGCGGGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGcc     >  1:2852426/1‑65 (MQ=255)
                                                 gcgcGGCGGGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGcc     >  1:2196748/1‑65 (MQ=255)
                                                 gcgcGGCGGGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGcc     >  1:1054047/1‑65 (MQ=255)
                                                    cggtggGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAac  >  1:2862863/1‑65 (MQ=38)
                                                    cggcggGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTc           >  1:2848892/1‑56 (MQ=255)
                                                    cggcggGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCaa   >  1:1670944/1‑64 (MQ=255)
                                                    cggcggGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAac  >  1:2692533/1‑65 (MQ=255)
                                                    cggcggGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAac  >  1:2183566/1‑65 (MQ=255)
                                                    cggcggGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAac  >  1:442160/1‑65 (MQ=255)
                                                    cggcggGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAac  >  1:2175579/1‑65 (MQ=255)
                                                    cggcggGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAac  >  1:1812244/1‑65 (MQ=255)
                                                    cggcggGCTGGAAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAac  >  1:1143153/1‑65 (MQ=255)
                                                               |                                                     
TGAGTGATTACGATGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAAC  >  W3110S.gb/3359738‑3359853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: