Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 1,482,576 (T)5→6 coding (1725/1758 nt) ynbC → predicted hydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb1,482,5711.T87.5% 18.6 / ‑2.1 8coding (1720/1758 nt)ynbCpredicted hydrolase
Reads supporting (aligned to +/- strand):  ref base . (1/0);  new base T (7/0);  total (8/0)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TCACTCGTGCGTGATGCCGGATTTGATAAATGCACACAACGGATTGATGAGTGGGGTATTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGAACGT  >  W3110S.gb/1482514‑1482613
                                                          |                                          
tCACTCGTGCGTGATGCCGGATTTGATAAATGCACACAACGGATTGATGAGTGGGGTATTTTTAc                                     >  1:1984737/1‑65 (MQ=255)
                                    caACGGATTGATGAGTGGGGTATTTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGAACGt  >  1:1051999/1‑65 (MQ=255)
                                    caACGGATTGATGAGTGGGGTATTTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGAACGt  >  1:1301120/1‑65 (MQ=255)
                                    caACGGATTGATGAGTGGGGTATTTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGAACGt  >  1:1370370/1‑65 (MQ=255)
                                    caACGGATTGATGAGTGGGGTATTTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGAACGt  >  1:1678791/1‑65 (MQ=255)
                                    caACGGATTGATGAGTGGGGTATTTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGAACGt  >  1:2325237/1‑65 (MQ=255)
                                    caACGGATTGATGAGTGGGGTATTTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGAACGt  >  1:235422/1‑65 (MQ=255)
                                    caACGGATTGATGAGTGGGGTATTTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGAACGt  >  1:2840924/1‑65 (MQ=255)
                                                          |                                          
TCACTCGTGCGTGATGCCGGATTTGATAAATGCACACAACGGATTGATGAGTGGGGTATTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGAACGT  >  W3110S.gb/1482514‑1482613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: