Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	401258	401279	22	4 [0]	[0] 15	phoA	alkaline phosphatase

ACTGCCGCACGTAATTATGCCGAAGGTGCGGGCGGCTTTTTTAAAGG  >  W3110S.gb/401211‑401257                                               | aCTGCCGCACGTAATTATGCCGAAGGTGCGGGCGGCTTTTTTAAAgg  <  1:1456204/47‑1 (MQ=255) aCTGCCGCACGTAATTATGCCGAAGGTGCGGGCGGCTTTTTTAAAgg  <  1:2792258/47‑1 (MQ=255) aCTGCCGCACGTAATTATGCCGAAGGTGCGGGCGGCTTTTTTAAAgg  <  1:2866803/47‑1 (MQ=255) aCTGCCGCACGTAATTATGCCGAAGGTGCGGGCGGCTTTTTTAAAgg  <  1:455397/47‑1 (MQ=255)                                               | ACTGCCGCACGTAATTATGCCGAAGGTGCGGGCGGCTTTTTTAAAGG  >  W3110S.gb/401211‑401257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑