Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	939144	939246	103	8 [0]	[0] 4	ycaJ	recombination protein

GCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGA  >  W3110S.gb/939079‑939143                                                                 | gCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGa  <  1:1149368/65‑1 (MQ=255) gCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGa  <  1:1259813/65‑1 (MQ=255) gCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGa  <  1:2013720/65‑1 (MQ=255) gCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGa  <  1:2369023/65‑1 (MQ=255) gCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGa  <  1:614228/65‑1 (MQ=255) gCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGa  <  1:810552/65‑1 (MQ=255)  ccGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGa  <  1:1733019/64‑1 (MQ=255)                    gTAAGCGGGTCCTGAAGCCTGAATTACTGACCTAAATCGCCGGTGa  <  1:1269052/46‑1 (MQ=255)                                                                 | GCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGA  >  W3110S.gb/939079‑939143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑