Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1085523	1085557	35	19 [1]	[0] 30	phoH	conserved hypothetical protein with nucleoside triphosphate hydrolase domain

CACCACTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCCTTTCTT  >  W3110S.gb/1085458‑1085526                                                                 |     caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:2271640/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:825733/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:824522/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:637268/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:617795/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:2691133/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:2599501/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:2511853/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:1072427/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:2133804/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:1796750/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:1417877/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:135954/65‑1 (MQ=255) caccacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:1212846/65‑1 (MQ=255)  accacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:217179/64‑1 (MQ=255)  accacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:1978590/64‑1 (MQ=255)  accacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:285101/64‑1 (MQ=255)  accacTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctt      <  1:14935/64‑1 (MQ=255)     acTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCctttctt  <  1:2847812/65‑1 (MQ=255)                                                                 |     CACCACTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCCTTTCTT  >  W3110S.gb/1085458‑1085526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑