Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1134628	1134663	36	7 [0]	[0] 4	flgE	flagellar hook protein

GATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGCAGATCAACCTGAAT  >  W3110S.gb/1134564‑1134627                                                                | gATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGCAGATCAACCTGAAt  >  1:1036524/1‑64 (MQ=255) gATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGCAGATCAACCTGAAt  >  1:2555311/1‑64 (MQ=255) gATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGCAGATCAACCTGAAt  >  1:371334/1‑64 (MQ=255) gATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGCAGATCAACCTGAAt  >  1:888770/1‑64 (MQ=255) gATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGCAGATCAACCTGAAt  >  1:922986/1‑64 (MQ=255) gATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGCAGATCAACCTGAAt  >  1:943781/1‑64 (MQ=255) gATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGAAGATCAACCTGAAt  >  1:826512/1‑64 (MQ=255)                                                                | GATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGCAGATCAACCTGAAT  >  W3110S.gb/1134564‑1134627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑