Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 1192069 1192090 22 2 [1] [0] 12 phoP/purB DNA‑binding response regulator in two‑component regulatory system with PhoQ/adenylosuccinate lyase

TCAACAACCAGTACGCGCATTTTTATTTCTCCCTGTCTTAATTATTAAAATAGTGTAACGCGATT  >  W3110S.gb/1192005‑1192069
                                                               | 
tCAACAACCAGTACGCGCATTTTTATTTCTCCCTGTCTTAATTATTAAAATAGTGTAAGGCGAt   >  1:1868811/1‑64 (MQ=255)
tCAACAACCAGTACGCGCATTTTTATTTCTCCCTGTCTTAATTATTAAAATAGTGTAACGCGAtt  >  1:217015/1‑65 (MQ=255)
                                                               | 
TCAACAACCAGTACGCGCATTTTTATTTCTCCCTGTCTTAATTATTAAAATAGTGTAACGCGATT  >  W3110S.gb/1192005‑1192069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: