Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1292093	1292110	18	24 [0]	[0] 3	rssB	response regulator of RpoS

GGAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGG  >  W3110S.gb/1292028‑1292092                                                                 | ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:125692/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:691909/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:2992129/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:2974795/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:2897686/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:278257/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:2615759/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:2486530/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:2195134/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:2111314/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:1872661/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:1446720/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:1426255/65‑1 (MQ=255) ggAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:1334979/65‑1 (MQ=255) ggAGCATATACCTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:1092951/65‑1 (MQ=255) gcaGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:1727255/63‑1 (MQ=255)  gAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:2264446/64‑1 (MQ=255)  gAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:2840898/64‑1 (MQ=255)  gAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:1333609/64‑1 (MQ=255)  gAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:312942/64‑1 (MQ=255)         taCGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:617020/57‑1 (MQ=255)                        aCCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:419522/42‑1 (MQ=255)                         ccAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:2927376/41‑1 (MQ=255)                           aGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATgg  <  1:733669/39‑1 (MQ=255)                                                                 | GGAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGG  >  W3110S.gb/1292028‑1292092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑