Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2283622	2283627	6	6 [0]	[0] 3	rsuA	16S rRNA pseudouridylate 516 synthase

AAGAAAATAGAGCACCGTTGGGTGATCAGGGTCGTCCGTGGAGCAAACATAGCCCTGAGGCTTAT  >  W3110S.gb/2283557‑2283621                                                                 | aaGAAAATAGAGCACCGTTGGGTGATCAGGGTCGTCCGTGGAGCAAACATAGCCCTGAGGCTTAt  <  1:1079524/65‑1 (MQ=255) aaGAAAATAGAGCACCGTTGGGTGATCAGGGTCGTCCGTGGAGCAAACATAGCCCTGAGGCTTAt  <  1:1413625/65‑1 (MQ=255) aaGAAAATAGAGCACCGTTGGGTGATCAGGGTCGTCCGTGGAGCAAACATAGCCCTGAGGCTTAt  <  1:2166560/65‑1 (MQ=255) aaGAAAATAGAGCACCGTTGGGTGATCAGGGTCGTCCGTGGAGCAAACATAGCCCTGAGGCTTAt  <  1:2928345/65‑1 (MQ=255) aaGAAAATAGAGCACCGTTGGGTGATCAGGGTCGTCCGTGGAGCAAACATAGCCCTGAGGCTTAt  <  1:863816/65‑1 (MQ=255)  aGAAAATAGAGCACCGTTGGGTGATCAGGGTCGTCCGTGGAGCAAACATAGCCCTGAGGCTTAt  <  1:3007937/64‑1 (MQ=255)                                                                 | AAGAAAATAGAGCACCGTTGGGTGATCAGGGTCGTCCGTGGAGCAAACATAGCCCTGAGGCTTAT  >  W3110S.gb/2283557‑2283621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑