Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2754868	2754909	42	16 [1]	[0] 8	intA	integrase

GGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAG  >  W3110S.gb/2754803‑2754886                                                                 |                    gggAGACTCCCCATGTCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:1472344/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:1157325/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:1683463/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:2057671/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:2526865/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:2693119/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:2704260/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:2851100/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:352210/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:365239/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:611284/65‑1 (MQ=255) gggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:972588/65‑1 (MQ=255)  ggAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:1081220/64‑1 (MQ=255)             aTGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:2564698/53‑1 (MQ=255)               ggCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAAcc                     <  1:1111453/51‑1 (MQ=255)                    gAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAg  >  1:995401/1‑65 (MQ=255)                                                                 |                    GGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAG  >  W3110S.gb/2754803‑2754886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑