Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4504599	4504623	25	12 [0]	[0] 11	yjgX	ECK4266:JW5764+JW4234+JW5763:b4575; KpLE2 phage‑like element; hypothetical protein

TGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAG  >  W3110S.gb/4504534‑4504598                                                                 | tGACCATAATGATGAACAGGATTGGCACTGTCGCTGCCCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:2873460/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:1354011/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:1493161/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:1509871/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:1730479/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:1893363/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:2523599/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:2628305/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:387665/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:5313/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:581979/1‑65 (MQ=255) tGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAg  >  1:864219/1‑65 (MQ=255)                                                                 | TGACCATAATGATGAACAGGATTGGCACTGTCGCTGACCGACAGCCCAAGGCCAGAAAAGTAAAG  >  W3110S.gb/4504534‑4504598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑