Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	565241	565248	8	20 [0]	[0] 15	intD/ybcC	predicted integrase/predicted exonuclease

CAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACC  >  W3110S.gb/565249‑565298 |                                                  cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:1310329/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:1491808/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:1539593/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:1600876/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:1735828/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:1846208/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:1870963/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:1917210/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:2153623/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:245525/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:2936320/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:3097999/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:776653/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:787157/50‑1 (MQ=255) cAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTAcc  <  1:85853/50‑1 (MQ=255) |                                                  CAGCGGAGACTGAAGCGCCGCAATGCAGGCTTGCCGTGTTGTGAGGTACC  >  W3110S.gb/565249‑565298

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑