Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1635406–1635636	1635717–1635640	5–312	10 [0]	[0] 14	pinQ	predicted site‑specific recombinase

TACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCA  >  W3110S.gb/1635718‑1635782 |                                                                 tACTTGAACGCACTGATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:173186/1‑65 (MQ=14) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:1309052/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:1328109/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:1588723/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:1623061/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:1655576/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:182195/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:1887085/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:2400947/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:375856/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:902566/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:908016/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGacca  >  1:926302/1‑65 (MQ=31) tACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGCCGacca  >  1:1458209/1‑65 (MQ=14) |                                                                 TACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCA  >  W3110S.gb/1635718‑1635782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑