Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1903905	1903973	69	5 [0]	[1] 32	manX	fused mannose‑specific PTS enzyme IIAB components

CGTGCTGTTTCTCGTTGATACATGGGGAGGCAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCG  >  W3110S.gb/1903944‑1904038                               |                                                                 cGTGCTGTTTCTCGTTGATACATGGGGAGGCAGCCCGTTCAATGCTGCCAGCCGCATTgtcgtc                                 >  1:2418187/1‑64 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:364889/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:2486679/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:2646392/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:2789990/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:285151/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:2988527/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:3096411/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:356468/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:975671/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:484995/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:491977/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:503353/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:574732/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:722736/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:750302/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:1292664/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:2258970/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:2109052/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:2056839/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:2052351/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:202412/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:199395/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:1783856/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:1760448/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:1628687/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:1624604/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:1609317/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:1583611/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:1494085/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:1369130/65‑1 (MQ=255)                               cAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCg  <  1:1340352/65‑1 (MQ=255)                               |                                                                 CGTGCTGTTTCTCGTTGATACATGGGGAGGCAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCG  >  W3110S.gb/1903944‑1904038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑