Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2163911	2163964	54	13 [1]	[0] 22	mdtD	multidrug efflux system protein

CGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCG  >  W3110S.gb/2163965‑2164027 |                                                               cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGAGCTTTGTCACGTTAcc    >  1:1158889/1‑61 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCttt               >  1:888499/1‑50 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:2434998/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:1074558/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:517524/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:464572/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:388156/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:354280/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:2962631/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:2753421/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:2743805/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:2457932/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:1182384/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:2430587/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:2150600/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:1809901/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:1649368/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:1524742/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:1521117/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:1455120/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:1362685/1‑63 (MQ=255) cGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCg  >  1:1268635/1‑63 (MQ=255) |                                                               CGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCG  >  W3110S.gb/2163965‑2164027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑