Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4321309	4321310	2	3 [0]	[0] 33	phnM	carbon‑phosphorus lyase complex subunit

GTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGA  >  W3110S.gb/4321311‑4321365 |                                                       gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTcgcg   >  1:1907193/1‑54 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTcgcg   >  1:2296229/1‑54 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:2737607/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1971131/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1974214/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:2144038/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:2281108/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:2332230/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:254280/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:895271/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:2852401/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:2976103/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:778244/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:781428/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:845097/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:84999/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1012210/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1955816/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1837787/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1829623/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1775938/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1762401/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1741688/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1732673/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1715796/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1660573/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1649371/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1643466/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1603896/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1545781/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1422173/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1372659/1‑55 (MQ=255) gTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGa  >  1:1097064/1‑55 (MQ=255) |                                                       GTACTGCTGCATCTGCGCATCAGTGAGGGAGTATTTGCCCTGATAATATTCGCGA  >  W3110S.gb/4321311‑4321365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑