Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 2,632,142 | C→T | M195I (ATG→ATA) | guaB ← | IMP dehydrogenase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 2,632,142 | 0 | C | T | 91.7% | 30.8 / ‑3.4 | 12 | M195I (ATG→ATA) | guaB | IMP dehydrogenase |
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (3/8); total (3/9) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CTTTACAGGCGTTCGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTGATCATGCCGATCAGGTGGAATTCGTCATCAACCACCAGCGCTTTTTCAACGCGTTTT > W3110S.gb/2632090‑2632196 | cTTTACAGGCGTTCGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTTATTATGCCGATCAg < 1:1925284/64‑1 (MQ=255) cTTTACAGGCGTTCGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTGATTATGCCGATCAg < 1:1619789/64‑1 (MQ=255) cTTTACAGGCGTTCGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTGATTATGCCGATCAg < 1:2096860/64‑1 (MQ=255) cTTTACAGGCGTTCGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTGATTATGCCGATCAg < 1:2177328/64‑1 (MQ=255) cTTTACAGGCGTTCGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTGATTATGCCGATCAg < 1:2224921/64‑1 (MQ=255) cTTTACAGGCGTTCGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTGATTATGCCGATCAg < 1:512126/64‑1 (MQ=255) cTTTACAGGCGTTCGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTGATTATGCCGATCAg < 1:590012/64‑1 (MQ=255) tttACAGGCGTTCGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTGATTATGCCGATCAg < 1:2478092/63‑1 (MQ=255) cGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTGATCATGCCGATCAg < 1:2717787/51‑1 (MQ=255) tttCTGGAAGTCTTTCACGGTGATTATGCCGATCAGGTGGAATTCGTCATCAACCACCAGCGCtt > 1:113320/1‑65 (MQ=255) tttCTGGAAGTCTTTCACGGTGATTATGCCGATCAGGTGGAATTCGTCATCAACCACCAGCGCtt > 1:2606219/1‑65 (MQ=255) tCACGGTGATTATGCCGATCAGGTGGAATTCGTCATCAACCACCAGCGCTTTTTCAACGCGtttt > 1:2101859/1‑65 (MQ=255) | CTTTACAGGCGTTCGGTTTACGTTCCGCTTTCTGGAAGTCTTTCACGGTGATCATGCCGATCAGGTGGAATTCGTCATCAACCACCAGCGCTTTTTCAACGCGTTTT > W3110S.gb/2632090‑2632196 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |