BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	W3110S.gb	1,695,171	T→C	V269V (GTA→GTG)	uidB ←	glucuronide transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	W3110S.gb	1,695,171	0	T	C	100.0%	103.1 / NA	28	V269V (GTA→GTG)	uidB	glucuronide transporter
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (23/5); total (23/5)

CGCGACCATCCCCGGCACCAGCGGTGCCGATGCCACAGTACCAACCAGGTTTTGCACCAGTACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAG  >  W3110S.gb/1695111‑1695219

cgcgACCATCCCCGGCACCAGCGGTGCCGATGCCACAGTACCAACCAGGTTTTGCACCAGCAcc                                               >  1:1096294/1‑64 (MQ=255)

cgcgACCATCCCCGGCACCAGCGGTGCCGATGCCACAGTACCAACCAGGTTTTGCACCAGCAcc                                               >  1:3094924/1‑64 (MQ=255)

                          ccGATGCCACAGTACCAACCAGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCAttt                    <  1:1883121/65‑1 (MQ=255)

                          ccGATGCCACAGTACCAACCAGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCAttt                    <  1:2670782/65‑1 (MQ=255)

                          ccGATGCCACAGTACCAACCAGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCAttt                    <  1:16514/65‑1 (MQ=255)

                            gATGCCACAGTACCAACCAGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCAttt                    <  1:2370887/63‑1 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTa   >  1:213996/1‑64 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:1064418/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:2121158/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:2362572/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:2459871/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:2844678/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:3085322/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:448173/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:457847/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:562358/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:597305/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:60792/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:1934/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:1197979/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:1200457/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:1231059/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:1658243/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:1531252/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:1377766/1‑65 (MQ=255)

                                            ccaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTAAACACATAGCGCACGTAg  >  1:1921290/1‑65 (MQ=255)

                                            caaGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAg  >  1:1510784/3‑65 (MQ=255)

                                              aGGTTTTGCACCAGCACCAGCACAGTGAACAGCCCGGTATCAttt                    <  1:2742920/45‑1 (MQ=255)

                                                      caccagcaccagCACAGTGAACAGCCCGGTATCATTTAAcaca              >  1:275039/1‑43 (MQ=255)

                                                      caccagcaccagCACAGTGAACAGCCCGGTATCATTTAAcaca              >  1:898749/1‑43 (MQ=255)

                                                      caccagcaccagCACAGTGAACAGCCCGGTATCATTTAAcaca              >  1:130021/1‑43 (MQ=255)

                                                      caccagcaccagCACAGTGAACAGCCCGGTATCATTTAAcaca              >  1:1361759/1‑43 (MQ=255)

                                                      caccagcaccagCACAGTGAACAGCCCGGTATCATTTAAcaca              >  1:2051617/1‑43 (MQ=255)

                                                      caccagcaccagCACAGTGAACAGCCCGGTATCATTTAAcaca              >  1:2625869/1‑43 (MQ=255)

                                                      caccagcaccagCACAGTGAACAGCCCGGTATCATTTAAcaca              >  1:1858989/1‑43 (MQ=255)

                                                      caccagcaccagCACAGTGAACAGCCCGGTATCATTTAAcaca              >  1:2372030/1‑43 (MQ=255)

                                                      caccagcaccagCACAGTGAACAGCCCGGTATCATTTAAcaca              >  1:2023597/1‑43 (MQ=255)

CGCGACCATCCCCGGCACCAGCGGTGCCGATGCCACAGTACCAACCAGGTTTTGCACCAGTACCAGCACAGTGAACAGCCCGGTATCATTTAACACATAGCGCACGTAG  >  W3110S.gb/1695111‑1695219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`