Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 1,810,661 A→G F96S (TTT→TCT)  yniB ← predicted inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb1,810,6610AG96.7% 100.3 / ‑3.8 30F96S (TTT→TCT) yniBpredicted inner membrane protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (22/7);  total (22/8)
Fisher's exact test for biased strand distribution p-value = 2.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01

CGCCTGGCGACTCATCCGGGCACCGGAATCCTGCAACGCCAGTCCGACAAAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGCCACCA  >  W3110S.gb/1810612‑1810705
                                                 |                                            
cgcCTGGCGACTCATCCGGGCACCGGAATCCTGCAACGCCAGTCCGACAGAAATCAGGATGaaa                                >  1:979352/1‑64 (MQ=255)
cgcCTGGCGACTCATCCGGGCACCGGAATCCTGCAACGCCAGTCCGACAGAAATCAGGATGaaa                                >  1:133966/1‑64 (MQ=255)
cgcCTGGCGACTCATCCGGGCACCGGAATCCTGCAACGCCAGTCCGACAGAAATCAGGATGaaa                                >  1:661466/1‑64 (MQ=255)
cgcCTGGCGACTCATCCGGGCACCGGAATCCTGCAACGCCAGTCCGACAGAAATCAGGATGaaa                                >  1:1431812/1‑64 (MQ=255)
cgcCTGGCGACTCATCCGGGCACCGGAATCCTGCAACGCCAGTCCGACAGAAATCAGGATGaaa                                >  1:518570/1‑64 (MQ=255)
cgcCTGGCGACTCATCCGGGCACCGGAATCCTGCAACGCCAGTCCGACAGAAATCAGGATGaaa                                >  1:410206/1‑64 (MQ=255)
cgcCTGGCGACTCATCCGGGCACCGGAATCCTGCAACGCCAGTCCGACAGAAATCAGGATGaaa                                >  1:1522462/1‑64 (MQ=255)
cgcCTGGCGACTCATCCGGGCACCGGAATCCTGCAACGCCAGTCCGACAGAAATCAGGATGaaa                                >  1:2747452/1‑64 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATaa                >  1:2840480/1‑52 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACTTTc           >  1:1122233/1‑57 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacc   >  1:1864911/1‑65 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacc   >  1:1425733/1‑65 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacc   >  1:2173997/1‑65 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacc   >  1:2233922/1‑65 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacc   >  1:2473183/1‑65 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacc   >  1:2556897/1‑65 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacc   >  1:158030/1‑65 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacc   >  1:1458702/1‑65 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacc   >  1:1484087/1‑65 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccac    >  1:103829/1‑64 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccac    >  1:714977/1‑64 (MQ=255)
                            tCCTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccac    >  1:2089625/1‑64 (MQ=255)
                             ccTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacca  <  1:2593951/65‑1 (MQ=255)
                             ccTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacca  <  1:3020835/65‑1 (MQ=255)
                             ccTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacca  <  1:1516731/65‑1 (MQ=255)
                             ccTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacca  <  1:15503/65‑1 (MQ=255)
                             ccTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacca  <  1:2728119/65‑1 (MQ=255)
                             ccTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacca  <  1:2159457/65‑1 (MQ=255)
                             ccTGCAACGCCAGTCCGACAGAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacca  <  1:1707360/65‑1 (MQ=255)
                             ccTGCAACGCCAGTCCGACAAAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGccacca  <  1:2031275/65‑1 (MQ=255)
                                                 |                                            
CGCCTGGCGACTCATCCGGGCACCGGAATCCTGCAACGCCAGTCCGACAAAAATCAGGATGAAAATCACCCAGAACATAACGTTCACGCCACCA  >  W3110S.gb/1810612‑1810705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: