Predicted mutation
evidence seq id position mutation annotation gene description
RA W3110S.gb 2,039,900 A→G I130I (ATT→ATC yedV ← predicted sensory kinase in two‑component regulatory system with YedW

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb2,039,9000AG98.4% 223.1 / ‑4.3 61I130I (ATT→ATCyedVpredicted sensory kinase in two‑component regulatory system with YedW
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (25/35);  minor base C (0/1);  total (25/36)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01

TGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTAATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGA  >  W3110S.gb/2039842‑2039961
                                                          |                                                             
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTc                                                           >  1:846/1‑63 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:2175450/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:991699/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:9508/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:812949/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:323663/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:2901733/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1040628/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1899259/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1799744/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1757686/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1683330/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1579196/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1575785/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1053707/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1091787/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1233697/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1410447/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1401449/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1131320/1‑64 (MQ=255)
tGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCg                                                          >  1:1144027/1‑64 (MQ=255)
                   cacaGTACCCGTTAATGATGGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTAt                                      >  1:87009/1‑65 (MQ=255)
                   cacaGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTAt                                      >  1:911548/1‑65 (MQ=255)
                   cacaGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTAt                                      >  1:1628078/1‑65 (MQ=255)
                   cacaGTAACCGTTAATGATGGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTAt                                      >  1:588549/1‑65 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCGTTAATAATGCTTc                       <  1:1548927/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:78431/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:566754/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:562658/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:1165612/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:876721/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2994567/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2668273/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2588179/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2503514/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2490074/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2445902/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:1594590/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:129363/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2009910/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2026904/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2094529/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:210591/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2106382/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:212950/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2199860/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2259255/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2287150/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:246064/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTGATTCGTAAAGCATCTATCTCTGCATCATTAATAATGCTTc                       <  1:2959927/64‑1 (MQ=255)
                                   gatgGCGAAACTTCATCAATATTCATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTc                       <  1:2994120/64‑1 (MQ=255)
                                                       atTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGa  <  1:1186680/65‑1 (MQ=255)
                                                       atTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGa  <  1:2752242/65‑1 (MQ=255)
                                                       atTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGa  <  1:2690354/65‑1 (MQ=255)
                                                       atTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGa  <  1:22142/65‑1 (MQ=255)
                                                       atTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGa  <  1:844341/65‑1 (MQ=255)
                                                       atTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGa  <  1:1275457/65‑1 (MQ=255)
                                                       atTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGa  <  1:1645727/65‑1 (MQ=255)
                                                       atTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGa  <  1:1414276/65‑1 (MQ=255)
                                                       atTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGa  <  1:982735/65‑1 (MQ=255)
                                                       atTGATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGa  <  1:1522449/65‑1 (MQ=255)
                                                          |                                                             
TGGCTGAAGCCAATTTAGCCACAGTAACCGTTAATGATGGCGAAACTTCATCAATATTAATTCGTAAAGCATCTATCTCTGTATCATTAATAATGCTTCTGTAAATGCCAGCTGCGCTGA  >  W3110S.gb/2039842‑2039961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: