| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 2,257,455 | C→T | G9R (GGA→AGA) | yeiJ ← | predicted nucleoside transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 2,257,455 | 0 | C | T | 98.6% | 218.5 / ‑4.2 | 69 | G9R (GGA→AGA) | yeiJ | predicted nucleoside transporter |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (0/68); total (1/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.45e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
TTCTTCTTGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCCCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACGGC > W3110S.gb/2257403‑2257514 | ttcttcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:49125/64‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:1464960/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:224852/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:2344943/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:2395591/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:2551055/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:2763428/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:291351/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:16305/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:162203/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:1538027/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:1402361/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:1376666/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:493731/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:590223/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:1276623/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:729952/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:842639/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:933494/60‑1 (MQ=255) tcttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:985324/60‑1 (MQ=255) cttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:5539/59‑1 (MQ=255) cttGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:2056543/59‑1 (MQ=255) tGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATa < 1:2944945/64‑1 (MQ=255) tGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATa < 1:2538759/64‑1 (MQ=255) tGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATa < 1:2825431/64‑1 (MQ=255) tGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATa < 1:226778/64‑1 (MQ=255) tGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATa < 1:2036751/64‑1 (MQ=255) tGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATa < 1:1429955/64‑1 (MQ=255) tGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATa < 1:1305227/64‑1 (MQ=255) tGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATa < 1:1287370/64‑1 (MQ=255) gataGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:3014525/61‑1 (MQ=255) gACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATa < 1:530101/63‑1 (MQ=255) gACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:2670373/64‑1 (MQ=255) gACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:450924/64‑1 (MQ=255) gACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:1973451/64‑1 (MQ=255) gACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:2579335/64‑1 (MQ=255) gACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:1222419/64‑1 (MQ=255) gACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:2542508/64‑1 (MQ=255) gACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:119180/64‑1 (MQ=255) gACAGTAAAAACGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:243742/64‑1 (MQ=255) aaaaaCGCAATCGTCAGCAATACCACCATTCTCAGAACACTtc < 1:403592/43‑1 (MQ=255) cGCAATCGTCAGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:1678376/53‑1 (MQ=255) ttCAGCAATACCACCATTCTCAGAACACTTCTCATGa < 1:774390/36‑1 (MQ=37) gTCAGCAATACCACCATTCTCAGAACACTTCTCATGa < 1:2596673/37‑1 (MQ=255) gTCAGCAATACCACCATTCTCAGAACACTTCTCATGa < 1:2435148/37‑1 (MQ=255) aGCAATACCACCATTCTCAGAACACTTCTCATGACATCCATAg < 1:879010/43‑1 (MQ=255) ccaccaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATg < 1:1060143/52‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATTTCATATTGGGCGACg < 1:1348744/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:511827/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:1211230/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:1317075/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:2985366/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:480111/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:704252/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:476353/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:434633/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:405944/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:361020/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:2150336/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:2910763/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:2867114/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:1750070/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:2545170/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:1008006/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:2523685/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:2412832/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:2022042/65‑1 (MQ=255) accaTTCTCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACg < 1:228506/65‑1 (MQ=255) caTTCCCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACGGc > 1:2019762/1‑65 (MQ=255) | TTCTTCTTGTTTACTGACAGTAAAAACGCAATCGTCAGCAATACCACCATTCCCAGAACACTTCTCATGACATCCATAGTGATTATCTCTTCATGTCATATTGGGCGACGGC > W3110S.gb/2257403‑2257514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |