| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 767,363 | T→C | L320L (TTG→CTG) | mngA → | fused 2‑O‑a‑mannosyl‑D‑glycerate specific PTS enzyme IIABC components |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 767,363 | 0 | T | C | 100.0% | 72.4 / NA | 23 | L320L (TTG→CTG) | mngA | fused 2‑O‑a‑mannosyl‑D‑glycerate specific PTS enzyme IIABC components |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (10/13); total (10/13) | |||||||||||
AACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAG > W3110S.gb/767295‑767429 | aaCCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGCTg < 1:3416056/71‑1 (MQ=255) aCCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGCTGa < 1:2510013/71‑1 (MQ=255) aaaaGTGTTAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTc > 1:3335134/1‑69 (MQ=255) aaaaCGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTCGCGGGGGGCAc < 1:4192893/71‑1 (MQ=255) aCAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTcg > 1:1320643/1‑71 (MQ=255) aCTGTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTAt < 1:4550395/71‑1 (MQ=255) aCTGTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTAt < 1:4057354/71‑1 (MQ=255) aCTGTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTAt < 1:3426464/71‑1 (MQ=255) aCTGTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTAt < 1:2625681/71‑1 (MQ=255) cTGTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCgg < 1:1311730/67‑1 (MQ=255) cTGTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTAt < 1:1422059/70‑1 (MQ=255) gTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTa > 1:3521715/1‑70 (MQ=255) gTTGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTAc > 1:112361/1‑71 (MQ=255) ttGAGCGGAATCTCTTTTGCCGTACCGCTGATTGTcg > 1:2613852/1‑37 (MQ=255) tctcTTTTGCCGTACCGCTGATTGTCGCGGGGGGCAc > 1:4279090/1‑37 (MQ=255) tctTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTAc > 1:3773003/1‑58 (MQ=255) tctTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCtt > 1:3611667/1‑71 (MQ=255) tctTTTGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCtt > 1:4044549/1‑71 (MQ=255) ttttGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCtt < 1:2117801/69‑1 (MQ=255) ttGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCgg < 1:4559829/70‑1 (MQ=255) ttGCCGTACCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCgg > 1:529354/1‑70 (MQ=255) aCCGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCtt < 1:4620650/60‑1 (MQ=255) ccGCTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAg < 1:2034188/70‑1 (MQ=255) | AACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAG > W3110S.gb/767295‑767429 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |