| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 774,849 | C→T | A40V (GCC→GTC) | ybgE → | conserved inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 774,849 | 0 | C | T | 100.0% | 106.3 / NA | 36 | A40V (GCC→GTC) | ybgE | conserved inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (19/17); total (19/17) | |||||||||||
GGGCGCTTTCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGT > W3110S.gb/774783‑774915 | gggCGCTTTCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGTcgcg < 1:2979929/71‑1 (MQ=255)gggCGCTTTCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGTcgcg < 1:424471/71‑1 (MQ=255) gcgcTTTCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGTCGCGaa < 1:1567937/71‑1 (MQ=255) ttCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGTCGCGAAGAc > 1:4080670/1‑69 (MQ=255) gcgcTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGTCGCGAAGAACAGTGaa > 1:1529866/1‑63 (MQ=255) cTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTgg < 1:1969532/69‑1 (MQ=255) ttAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATg < 1:704827/70‑1 (MQ=255) gATGTATGTTTTGGGACCCATCTCGTTTTGTcgcg < 1:252746/35‑1 (MQ=255) gATGTATGTTTTGGGACCCATCTCGTTTTGTCGCGAAGAc < 1:948534/40‑1 (MQ=255) tgtatgtTTTGGGACCCATCTCGTTTTGTCGCGAAGACCa > 1:1321001/1‑40 (MQ=255) tgtatgtTTTGGGACCCATCTCGTTTTGTCGCGAAGACCa > 1:2680478/1‑40 (MQ=255) tgtatgtTTTGGGACCCATCTCGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCt > 1:1040390/1‑71 (MQ=255) tatgtTTTGGGACCCATCTCGTTTTGTCGCGAAGAc > 1:3782954/1‑36 (MQ=255) tatgtTTTGGGACCCATCTCGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCa > 1:4327242/1‑57 (MQ=255) tatgtTTTGGGACCCATCTCGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGa > 1:1580076/1‑71 (MQ=255) tatgtTTTGGGACCCATCTCGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGa < 1:2111877/71‑1 (MQ=255) tatgtTTTGGGACCCATCTCGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGa > 1:2679293/1‑71 (MQ=255) tatgtTTTCGGACCCATCTCGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCa > 1:3696707/1‑57 (MQ=255) ttttGGGACCTATCTCGTTTTGTCGCGAAGACCAg > 1:1623554/1‑35 (MQ=38) ttttGGGACCCATCTCGTTTTGTCGCGAAGACCAg > 1:967430/1‑35 (MQ=255) ttttGGGACCCATCTCGTTTTGTCGCGAAGACCAg > 1:3443418/1‑35 (MQ=255) ccATCTCGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCtg < 1:2242848/71‑1 (MQ=255) cATCTCGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCtgt < 1:2522904/71‑1 (MQ=255) tctcGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGTTTTATTGCTGa < 1:2509728/55‑1 (MQ=255) tctcGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGa < 1:3962027/55‑1 (MQ=255) tctcGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGa < 1:4233771/55‑1 (MQ=255) tctcGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCg < 1:4264327/64‑1 (MQ=255) ctcGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTc < 1:1150160/65‑1 (MQ=255) tcGTTTTGTCGCGAGGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTg > 1:4493506/1‑71 (MQ=255) tcGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGa > 1:1287190/1‑53 (MQ=255) tcGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTg > 1:4295631/1‑71 (MQ=255) tcGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTg > 1:186123/1‑71 (MQ=255) tcGTTTTGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTg > 1:1283168/1‑71 (MQ=255) tcGTTATGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTg > 1:2273055/1‑71 (MQ=255) ttGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGgtgt < 1:3810520/70‑1 (MQ=255) ttGTCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGgtgt < 1:752628/70‑1 (MQ=255) | GGGCGCTTTCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGT > W3110S.gb/774783‑774915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |