| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 1,921,924 | G→A | intergenic (+67/‑13) | yebT → / → yebU | conserved hypothetical protein/predicted methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 1,921,924 | 0 | G | A | 100.0% | 49.9 / NA | 19 | intergenic (+67/‑13) | yebT/yebU | conserved hypothetical protein/predicted methyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (14/5); total (14/5) | |||||||||||
ATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAGTGGTACATGCTCGTGGCCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGC > W3110S.gb/1921857‑1921985 | atGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAATgg > 1:1304488/1‑71 (MQ=255) cccACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAATGGTa < 1:736140/70‑1 (MQ=255) gCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCGTGTTTTTTTGCCAATGGTACATGCTc > 1:4261233/1‑71 (MQ=255) gCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAATGGTAc > 1:4095352/1‑65 (MQ=255) tGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAATGGTa < 1:377557/55‑1 (MQ=255) ccTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAATGGTACATGCTCGTGGCCCAaca > 1:374245/1‑71 (MQ=255) tGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAATGGTACATGCTCGTGGCCCAacaca > 1:712250/1‑71 (MQ=255) gcgcCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAATGGTACATGCTCGTgg > 1:4527192/1‑61 (MQ=255) gCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAATGGTACa > 1:2784747/1‑44 (MQ=255) gCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAATGGTACATGCTCGTGGCCCAACACACCGTTTAtt > 1:546678/1‑71 (MQ=255) tttATGCTAAACTGCGCGCCTGTTTTTTTGCCAATGGTACATGCTCGTGGCCCAACACACCGTTTATTTcc > 1:2154024/1‑71 (MQ=255) tATGCTAAACTGCGCGCCTGTTTTTTTGCCAATGGTACATGCTCGTGGCCCAacaca > 1:2761798/1‑57 (MQ=255) tATGCTAAACTGCGCGCCTG‑TTTTTTGCCAATGGTACATGCTCGTGGCCCAACACACCGTTTATTTCCCg > 1:1533225/1‑70 (MQ=255) aaCTGCGCGCCTGTTTTTTTGCCAATGGTACATGCTCGTGGCCCAACACACCGTTTATTTCCCGGACGc < 1:2431408/69‑1 (MQ=255) ttGCGCGCCTGTTTTTTTGCCAATGGTACATGCTCGTGGCCCAACACACCGTTTATTTCCCGGACGCGttt > 1:1681983/2‑71 (MQ=255) cTGTTTTTTTGCCAATGGTACATGCTCGTGGCCCAACACACCGTTTATTTCCCGGACGCCTTTCTGAcaca < 1:3442377/71‑1 (MQ=255) tttttttGCCAATGGTACATGCTCGTGGCCCAACACACCGTTTATTTCCCGGACGc < 1:3592977/56‑1 (MQ=255) tttttGCCAATGGTACATGCTCGTGGCCCAACACACCGTTTATTTCCCGGACGCCTTTc > 1:483493/1‑59 (MQ=255) tttttGCCAATGGTACATGCTCGTGGCCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATgc > 1:748158/1‑71 (MQ=255) | ATGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAGTGGTACATGCTCGTGGCCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGC > W3110S.gb/1921857‑1921985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |