| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 2,867,422 | A→G | intergenic (‑13/+127) | nlpD ← / ← pcm | predicted outer membrane lipoprotein/L‑isoaspartate protein carboxylmethyltransferase type II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 2,867,422 | 0 | A | G | 100.0% | 82.9 / NA | 25 | intergenic (‑13/+127) | nlpD/pcm | predicted outer membrane lipoprotein/L‑isoaspartate protein carboxylmethyltransferase type II |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (8/17); total (8/17) | |||||||||||
ACCAGTGACAAAGCCGCAATGCGGCGAACGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGAAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTGGAAAAGATG > W3110S.gb/2867354‑2867488 | aCCAGTGACAAAGCCGCAATGCGGCGAACGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGgaa < 1:3697518/71‑1 (MQ=255)aCCAGTGACAAAGCCGCAATGCGGCGAACGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGgaa < 1:2936572/71‑1 (MQ=255)aCCAGTGACAAAGCCGCAATGCGGCGAACGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGgaa < 1:2877775/71‑1 (MQ=255) gCAATGCGGCGAACGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCGAGGGAAAATTGGTTAATAAcc < 1:151206/71‑1 (MQ=255) gCAATGCGGCGAACGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAAcc < 1:1424143/71‑1 (MQ=255) gcggcgAACGGTGAATTTTGGGCTTCCCGCGCTCATTTATCACCCAGGGAAAATTGGTTAATAACCAGTGa > 1:3961730/1‑71 (MQ=255) gcggcgAACGGTGAATTTTGGGCTT‑CCGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGa > 1:1613448/1‑70 (MQ=255) cggcgAACGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGa > 1:2455234/1‑70 (MQ=255) gcgAACGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGACAt < 1:4275116/71‑1 (MQ=255) aaCGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGACATAAt < 1:2325988/71‑1 (MQ=255) cGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGACATAATTa > 1:709955/1‑71 (MQ=255) aaTTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTg > 1:4188784/1‑71 (MQ=255) ggCTTCCCGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCa < 1:1365439/71‑1 (MQ=255) gCTTCCCGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCAc < 1:200393/71‑1 (MQ=255) gCTTCCAGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCAc < 1:89559/71‑1 (MQ=255) tCCCGCGCTCATTTATCCCCCAGGGAAAATTGGTtaat < 1:2126754/38‑1 (MQ=255) cccGCGCTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCt < 1:1449343/70‑1 (MQ=255) ccGCGCTCATTTATCCCCCAGGGAAAATTGGTtaat < 1:2036106/36‑1 (MQ=255) cTCATTTATCCCCCAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCCCCCTACTg > 1:3470431/1‑68 (MQ=255) ttATCCCCCAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTg > 1:2760885/1‑70 (MQ=255) tATCCCCCAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTgg > 1:267682/1‑70 (MQ=255) ccccAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTGGaaaa < 1:3308747/70‑1 (MQ=255) ccccAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTGGaaaa < 1:1117121/70‑1 (MQ=255) ccccAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTGGaaaa < 1:1333381/70‑1 (MQ=255) ccccAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTGGaaaa < 1:4365074/70‑1 (MQ=255) ccccAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTGGAAAAg < 1:553770/71‑1 (MQ=255) cAGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTGGAAAAGATg < 1:1135561/71‑1 (MQ=255) aGGGAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTGGAAAAg < 1:1204623/67‑1 (MQ=255) | ACCAGTGACAAAGCCGCAATGCGGCGAACGGTGAATTTTGGGCTTCCCGCGCTCATTTATCCCCCAGGAAAAATTGGTTAATAACCAGTGACATAATTACCGTGCAAGGCACCCTACTGAACACTGGAAAAGATG > W3110S.gb/2867354‑2867488 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |