| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 4,032,071 | +CG | coding (1896/2199 nt) | zntA ← | zinc, cobalt and lead efflux system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 4,032,066 | 1 | . | G | 100.0% | 64.2 / NA | 19 | P634? (CCA→CNA) | zntA | zinc, cobalt and lead efflux system |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (19/0); total (19/0) | |||||||||||
| * | W3110S.gb | 4,032,066 | 2 | . | C | 100.0% | 65.5 / NA | 19 | P634R (CCA→CGA) | zntA | zinc, cobalt and lead efflux system |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (19/0); total (19/0) | |||||||||||
TCCCGATGGCGGCAGCTTTCATCGCTG‑‑GCGCGTCGTTAATACCGTCACCGACCATCGCCAGCG > W3110S.gb/4032040‑4032102 || tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATAcc > 1:1356275/1‑45 (MQ=25)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:996695/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:718483/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:672026/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:648203/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:578737/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:507991/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:305862/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:288577/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:2513513/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:2338783/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:2148151/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:2040431/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:2007508/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:1393842/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgcg > 1:1367992/1‑65 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgc > 1:2326216/1‑64 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgc > 1:645296/1‑64 (MQ=38)tCCCGATGGCGGCAGCTTTCATCGCTGGCGCGCGTCGTTAATACCGTCACCGACCATCGCCAgc > 1:1346848/1‑64 (MQ=38) || TCCCGATGGCGGCAGCTTTCATCGCTG‑‑GCGCGTCGTTAATACCGTCACCGACCATCGCCAGCG > W3110S.gb/4032040‑4032102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |