Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2164792	2164832	41	36 [0]	[2] 25	mdtD	multidrug efflux system protein

CCCTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGATT  >  W3110S.gb/2164727‑2164791                                                                 | cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:382373/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1020424/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:2242485/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:2315577/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:2389978/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:2430462/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:290732/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:301769/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:303417/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:2188288/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:489990/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:491792/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:541590/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:600810/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:716560/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:813233/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:86579/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:929508/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1661837/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1030272/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1263558/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1399521/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1519407/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1597757/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1635876/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1652753/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:213336/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1782440/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1802554/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1851048/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1918205/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:1945120/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:2037546/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:2104400/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGAtt  >  1:2121842/1‑65 (MQ=255) cccTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGATGTCGATGAtt  >  1:587492/1‑65 (MQ=255)                                                                 | CCCTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGATT  >  W3110S.gb/2164727‑2164791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑