Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2216931	2216940	10	34 [0]	[1] 5	yehU	predicted sensory kinase in two‑component system with YehT

CTCTGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCA  >  W3110S.gb/2216866‑2216930                                                                 | ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:481813/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:2364763/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:2387187/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:2500816/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:320098/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:361793/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:406576/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:427251/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:468734/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:2314618/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:617723/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:656792/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:724179/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:873837/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:9585/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:96209/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:995529/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1740754/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1135998/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1185416/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1314523/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1329552/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1525493/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1528095/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1627287/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1095700/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1782122/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1792767/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:2010793/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:2080159/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:2179208/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:2201338/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:2292135/1‑65 (MQ=255) ctctGACTGGGTGAGCATCGCTTTTTGCCGCTCATATAGCCCGGCAAGGATCTGCGCCGAAAGCa  >  1:1171119/1‑65 (MQ=255)                                                                 | CTCTGACTGGGTGAGCATCGCTTTTTGCCGCTCATATTGCCCGGCAAGGATCTGCGCCGAAAGCA  >  W3110S.gb/2216866‑2216930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑