Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2340475	2340517	43	61 [0]	[0] 4	yfaA	hypothetical protein

CTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAC  >  W3110S.gb/2340410‑2340474                                                                 | cTGGCGGATTTATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1790215/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:472850/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:2167480/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:2243267/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:2291795/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:2394603/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:2515204/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:2523054/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:2542781/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:276806/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:287371/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:290410/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:3158/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:365583/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:371590/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:374399/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:2035178/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:493955/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:547691/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:552789/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:555705/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:620120/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:630623/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:638058/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:692350/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:77548/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:787050/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:791243/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:816877/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:838223/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:927920/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1698112/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1174494/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:119167/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1223323/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1246866/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:124706/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1271695/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1283456/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1312329/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1314315/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1398182/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1413859/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1447753/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1462198/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1581321/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:2101644/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1713842/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1724787/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1733789/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1763554/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1789746/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1791154/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1792724/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:180216/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1820967/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1865611/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:198184/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1989975/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:2020727/1‑65 (MQ=255) cTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAc  >  1:1040640/1‑65 (MQ=255)                                                                 | CTGGCGGATTCATCATTTAACGCCACAAAACTGTGCCAGCCGTCGTTACCCATTTCGAAGCGTAC  >  W3110S.gb/2340410‑2340474

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑