Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2940387	2940399	13	54 [0]	[0] 6	gcvA	DNA‑binding transcriptional dual regulator

AAGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTATTTT  >  W3110S.gb/2940322‑2940386                                                                 | aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:340796/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2248020/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2261707/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2285299/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2342680/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2408727/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2412468/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:242541/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2450045/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2496505/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2507603/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:267983/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:330624/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:331495/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2242687/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:428542/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:431777/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:558866/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:563467/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:577819/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:660073/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:682359/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:768931/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:802052/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:925207/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:975611/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:998788/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1499176/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1011530/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1033413/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:103809/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1142952/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1206496/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1221084/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1234701/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1273371/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1309204/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:136386/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1392661/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1436863/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1447998/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1003527/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1541451/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:157408/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1579630/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1649642/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:171145/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1719564/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1767468/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1827517/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:1979721/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2028206/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTAtttt  >  1:2215344/1‑65 (MQ=255) aaGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGAGGCTAtttt  >  1:1582471/1‑65 (MQ=255)                                                                 | AAGCGGAATTTTTCTTGTTCAGCAGCGGCTTTCGCCAGGATCCATTGGCGAAAGGCGGCTATTTT  >  W3110S.gb/2940322‑2940386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑