Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3139405	3139433	29	77 [0]	[0] 14	hybE	hydrogenase 2‑specific chaperone

GGCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGC  >  W3110S.gb/3139340‑3139404                                                                 | gtcATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2089675/63‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2095852/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:269035/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2519850/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:251347/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2465292/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2418690/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2362394/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2242015/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2220974/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:295170/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2076782/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2071649/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1998972/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1003378/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1955889/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1938225/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1960205/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:366011/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:381207/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:436455/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:5105/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:533248/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:554661/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:587643/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:682116/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:714098/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:737798/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:759749/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:802392/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:861393/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:912125/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:930356/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1516273/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1193534/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1252550/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1174021/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1257039/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1289331/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1301355/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1168033/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:140696/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1126853/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1409117/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:142405/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1075564/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1504309/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1746907/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1936741/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1923971/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1889052/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1875097/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1522509/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1733678/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1031696/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1586693/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1545258/65‑1 (MQ=255) ggCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1063459/65‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAACCGCTGc  <  1:310985/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:888253/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:918440/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:100591/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1181236/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1931434/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1226866/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:490520/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2488161/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:2267502/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1571864/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1633921/64‑1 (MQ=255)  gCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:19523/64‑1 (MQ=255)   cATTGAAGGATGCAGAAAAGAGCGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:137348/63‑1 (MQ=255)   cATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:553551/63‑1 (MQ=255)    aTTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:1035607/62‑1 (MQ=255)      tGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:577468/60‑1 (MQ=255)                  aaaaGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGc  <  1:266461/48‑1 (MQ=255)                         agaTCGTGCATCGAACGCCGGGCAATTTCTTCTAACGCTGc  <  1:1951835/41‑1 (MQ=255)                                                                 | GGCATTGAAGGATGCAGAAAAGAGAGATCGTGCATCGAACGCCGGGCAATTTCTTCAAACGCTGC  >  W3110S.gb/3139340‑3139404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑