Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3308735	3308738	4	26 [0]	[0] 45	nlpI	conserved hypothetical protein

GTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAG  >  W3110S.gb/3308670‑3308734                                                                 | gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:2122092/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:903354/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:753499/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:712508/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:580573/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:529390/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:480866/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:381205/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:2316793/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:2265745/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:2172349/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:213916/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1039248/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:2055596/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1776488/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1709676/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1630035/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1519803/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1470953/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:14400/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1370185/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1175024/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1099605/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1082421/65‑1 (MQ=255) gTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:1049416/65‑1 (MQ=255)        gCAATGGTACAGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAg  <  1:291845/58‑1 (MQ=255)                                                                 | GTCGGTTGCAATGGTACCGCGAGGACTTCACTTTTACGCCAGGAAGTATTACTGCATCCTGCAAG  >  W3110S.gb/3308670‑3308734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑