Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3316832	3316888	57	27 [0]	[0] 23	nusA	transcription termination/antitermination L factor

CAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAT  >  W3110S.gb/3316767‑3316831                                                                 | cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:328667/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:950938/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:93953/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:854044/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:709269/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:678218/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:544554/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:539589/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:515478/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:475059/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:452255/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:392966/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:1131850/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:2541938/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:2370819/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:2270980/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:1954874/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:1816651/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:1737072/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:1635914/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:1568363/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:1386048/65‑1 (MQ=255) cAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:1245639/65‑1 (MQ=255)  aGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:366921/64‑1 (MQ=255)                ggAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:624195/50‑1 (MQ=255)                            gAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:145073/38‑1 (MQ=255)                             aaCAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAt  <  1:1496574/37‑1 (MQ=255)                                                                 | CAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCGGGCGAACGGAAT  >  W3110S.gb/3316767‑3316831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑