Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3411750	3411757	8	77 [0]	[0] 7	yhdJ	predicted methyltransferase

TGTTTATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGGCAG  >  W3110S.gb/3411686‑3411749                                                                | tGTTTATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2319623/64‑1 (MQ=255) tGTTTATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1009074/64‑1 (MQ=255) tGTTTATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:260304/64‑1 (MQ=255) tGTTTATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:144935/64‑1 (MQ=255)  gTTTATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGGAGGgcag  <  1:231260/63‑1 (MQ=255)     tATCTACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:982492/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTTAAAAAGCAGGgcag  <  1:1494478/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:330790/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2368131/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:956571/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:233154/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:931005/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2391626/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2466234/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2487660/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2495830/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2503835/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:923637/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:264096/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:27274/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:302986/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:305577/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:778926/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:355074/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:355401/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:410321/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:465597/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:472558/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:48069/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:535047/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:784750/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:569609/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:615121/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:712561/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:736506/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:756453/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1895271/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1281669/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1331184/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1252992/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1414611/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1569970/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1246326/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1672250/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2292334/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1180204/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1760784/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1886980/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1920211/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1993338/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1060213/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2280768/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2229621/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2150941/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2119410/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1133685/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:198011/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1925984/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1921250/60‑1 (MQ=255)     tATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTGCTGAAAAAGCAGGgcag  <  1:1581728/60‑1 (MQ=255)      aTCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:958259/59‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1152378/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:891552/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1247737/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1707230/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1144226/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:651617/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1488720/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:46731/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:369040/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:1871788/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:291310/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:288312/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2540840/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:2267011/45‑1 (MQ=255)                    tGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:236149/45‑1 (MQ=255)                              gCAGAGTGCCACCGCGTTCTGAAAAAGCAGGgcag  <  1:576182/35‑1 (MQ=255)                                                                | TGTTTATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGGCAG  >  W3110S.gb/3411686‑3411749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑