Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3435547	3435565	19	15 [0]	[0] 5	yjaH	conserved hypothetical protein

GCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGGCGC  >  W3110S.gb/3435482‑3435546                                                                 | gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:1381042/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:1641355/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:1865946/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:1920950/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:1976057/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:2083108/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:2513462/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:310468/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:432480/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:511275/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:547736/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:767193/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTCGCGgcgc  <  1:2320750/65‑1 (MQ=255) gCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACAACAACAGAAGAGCGGCTCTGGCGgcgc  <  1:1887731/65‑1 (MQ=255)                     aGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGgcgc  <  1:2378659/45‑1 (MQ=255)                                                                 | GCGAACCTTCGGGCGCTTCCAGCCATGCCACGCTGACATCAACAGAAGAGCGGCTCTGGCGGCGC  >  W3110S.gb/3435482‑3435546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑