Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3771027	3771082	56	31 [0]	[0] 29	[cbrA]	[cbrA]

GCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACG  >  W3110S.gb/3770962‑3771026                                                                 | gCATTTTGCCTGCTAACTTTCGTGCTAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2289932/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2108183/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:914299/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:899541/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:750399/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:614917/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:488305/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:436969/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:261930/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2526351/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2390534/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2383352/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2349668/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2309772/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2265095/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2238790/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1013278/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2057994/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:2045404/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:180522/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:175552/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1463164/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1404648/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1332238/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1284963/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1256341/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1222691/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1124318/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1105759/65‑1 (MQ=255) gCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1064068/65‑1 (MQ=255) ccATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACg  <  1:1374803/64‑1 (MQ=255)                                                                 | GCATTTTGCCTGCTAACTTTCGTGCCAACGCCGATCCTGCCGGGCCGAGGCCAATAATCGCCACG  >  W3110S.gb/3770962‑3771026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑