Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3852363	3852375	13	43 [0]	[0] 5	envC	protease with a role in cell division

TACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTGG  >  W3110S.gb/3852298‑3852362                                                                 | tACGACGAAATGGTAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1203804/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:445746/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:20855/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:2090273/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:2105312/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:2187974/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:221915/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:2256851/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:2279787/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:2310314/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:253340/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:442944/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:198390/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:464943/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:521105/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:582604/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:605879/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:828879/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:855642/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:951493/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:953897/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:969193/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1494056/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1093423/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1122935/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1255153/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1288498/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1332981/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1351949/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1382769/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1430254/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1457188/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:2051750/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1526272/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:163609/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1688142/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1713597/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1742880/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1867429/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1905138/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1928857/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTgg  >  1:1075231/1‑65 (MQ=255) tACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACAGCCTGACCCTgg  >  1:1318191/1‑65 (MQ=255)                                                                 | TACGACGAAATGGAAACAAAACTTATCTTCCCAACCACGGCTGTGGATTGACCGCCTGACCCTGG  >  W3110S.gb/3852298‑3852362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑