Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3867390	3867392	3	16 [0]	[0] 5	mtlA	fused mannitol‑specific PTS enzyme IIABC components

AGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTG  >  W3110S.gb/3867325‑3867389                                                                 | aGGATCAGACGCGGCTTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:2117272/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGGTTTCGTGGATACCCCCCAGGAAGTg  >  1:422632/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:1242979/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:1472594/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:2062639/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:2277431/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:2342776/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:2372096/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:349683/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:365133/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:435624/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:435716/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:57998/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:655856/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTg  >  1:847041/1‑65 (MQ=255) aGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGAGGATACCCCCCAGGAAGTg  >  1:1366072/1‑65 (MQ=255)                                                                 | AGGATCAGACGCGGATTCATCAGCACATACGGGAAGTAGATTTCGTGGATACCCCCCAGGAAGTG  >  W3110S.gb/3867325‑3867389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑